Antisense transcription in the mammalian transcriptome S Katayama, Y Tomaru, T Kasukawa, K Waki, M Nakanishi, M Nakamura, ... Science 309 (5740), 1564-1566, 2005 | 2042 | 2005 |
Feedback between p21 and reactive oxygen production is necessary for cell senescence JF Passos, G Nelson, C Wang, T Richter, C Simillion, CJ Proctor, S Miwa, ... Molecular systems biology 6 (1), 347, 2010 | 972 | 2010 |
The Synthetic Biology Open Language (SBOL) provides a community standard for communicating designs in synthetic biology M Galdzicki, KP Clancy, E Oberortner, M Pocock, JY Quinn, CA Rodriguez, ... Nature biotechnology 32 (6), 545-550, 2014 | 314 | 2014 |
Keratinocyte apoptosis in epidermal remodeling and clearance of psoriasis induced by UV radiation SC Weatherhead, PM Farr, D Jamieson, JS Hallinan, JJ Lloyd, A Wipat, ... Journal of Investigative Dermatology 131 (9), 1916-1926, 2011 | 123 | 2011 |
Standard virtual biological parts: a repository of modular modeling components for synthetic biology MT Cooling, V Rouilly, G Misirli, J Lawson, T Yu, J Hallinan, A Wipat Bioinformatics 26 (7), 925-931, 2010 | 108 | 2010 |
A Genomewide Suppressor and Enhancer Analysis of cdc13-1 Reveals Varied Cellular Processes Influencing Telomere Capping in Saccharomyces cerevisiae SG Addinall, M Downey, M Yu, MK Zubko, J Dewar, A Leake, J Hallinan, ... Genetics 180 (4), 2251-2266, 2008 | 103 | 2008 |
Cellular senescence: unravelling complexity JF Passos, C Simillion, J Hallinan, A Wipat, T Von Zglinicki Age 31, 353-363, 2009 | 73 | 2009 |
A comparison of neutral landscapes-NK, NKp and NKq N Geard, J Wiles, J Hallinan, B Tonkes, B Skellett Proceedings of the 2002 Congress on Evolutionary Computation. CEC'02 (Cat …, 2002 | 59 | 2002 |
A transcriptional signature of fatigue derived from patients with primary Sjögren’s syndrome K James, S Al-Ali, J Tarn, SJ Cockell, CS Gillespie, V Hindmarsh, J Locke, ... PloS one 10 (12), e0143970, 2015 | 54 | 2015 |
Gene duplication and hierarchical modularity in intracellular interaction networks J Hallinan Biosystems 74 (1-3), 51-62, 2004 | 53 | 2004 |
Model annotation for synthetic biology: automating model to nucleotide sequence conversion G Misirli, JS Hallinan, T Yu, JR Lawson, SM Wimalaratne, MT Cooling, ... Bioinformatics 27 (7), 973-979, 2011 | 40 | 2011 |
Evolving genetic regulatory networks using an artificial genome J Hallinan, J Wiles Proceedings of the second conference on Asia-Pacific bioinformatics-Volume …, 2004 | 37 | 2004 |
Data integration and mining for synthetic biology design G Mısırlı, J Hallinan, M Pocock, P Lord, JA McLaughlin, H Sauro, A Wipat ACS synthetic biology 5 (10), 1086-1097, 2016 | 36 | 2016 |
Network motifs, feedback loops and the dynamics of genetic regulatory networks JS Hallinan, PT Jackway 2005 IEEE Symposium on Computational Intelligence in Bioinformatics and …, 2005 | 34 | 2005 |
The SBOL stack: a platform for storing, publishing, and sharing synthetic biology designs C Madsen, JA McLaughlin, G Mısırlı, M Pocock, K Flanagan, J Hallinan, ... ACS synthetic biology 5 (6), 487-497, 2016 | 33 | 2016 |
e-Science: relieving bottlenecks in large-scale genome analyses T Craddock, CR Harwood, J Hallinan, A Wipat Nature reviews microbiology 6 (12), 948-954, 2008 | 32 | 2008 |
Asynchronous dynamics of an artificial genetic regulatory network J Hallinan, J Wiles | 30 | 2004 |
B-cell activity markers are associated with different disease activity domains in primary Sjögren’s syndrome K James, C Chipeta, A Parker, S Harding, SJ Cockell, CS Gillespie, ... Rheumatology 57 (7), 1222-1227, 2018 | 29 | 2018 |
Composable modular models for synthetic biology G Misirli, J Hallinan, A Wipat ACM Journal on Emerging Technologies in Computing Systems (JETC) 11 (3), 1-19, 2014 | 29 | 2014 |
BacillOndex: An integrated data resource for systems and synthetic biology G Misirli, A Wipat, J Mullen, K James, M Pocock, W Smith, N Allenby, ... Journal of integrative bioinformatics 10 (2), 103-116, 2013 | 21 | 2013 |