| OMA 2011: orthology inference among 1000 complete genomes AM Altenhoff, A Schneider, GH Gonnet, C Dessimoz Nucleic acids research 39 (suppl_1), D289-D294, 2010 | 237 | 2010 |
| OMA Browser—exploring orthologous relations across 352 complete genomes A Schneider, C Dessimoz, GH Gonnet Bioinformatics 23 (16), 2180-2182, 2007 | 144 | 2007 |
| Estimates of positive Darwinian selection are inflated by errors in sequencing, annotation, and alignment A Schneider, A Souvorov, N Sabath, G Landan, GH Gonnet, D Graur Genome biology and evolution 1, 114-118, 2009 | 131 | 2009 |
| A method for inferring the rate of occurrence and fitness effects of advantageous mutations A Schneider, B Charlesworth, A Eyre-Walker, PD Keightley Genetics 189 (4), 1427-1437, 2011 | 107 | 2011 |
| Empirical codon substitution matrix A Schneider, GM Cannarozzi, GH Gonnet BMC bioinformatics 6 (1), 134, 2005 | 99 | 2005 |
| OMA, a comprehensive, automated project for the identification of orthologs from complete genome data: introduction and first achievements C Dessimoz, G Cannarozzi, M Gil, D Margadant, A Roth, A Schneider, ... Lecture Notes in Computer Science 3678, 61-72, 2005 | 95 | 2005 |
| A phylogenomic study of human, dog, and mouse G Cannarozzi, A Schneider, G Gonnet PLoS Computational Biology 3 (1), e2, 2007 | 87 | 2007 |
| Codon evolution: mechanisms and models GM Cannarozzi, A Schneider Recherche, 2012 | 47 | 2012 |
| A genomic approach to examine the complex evolution of laurasiatherian mammals BM Hallström, A Schneider, S Zoller, A Janke PLoS One 6 (12), e28199, 2011 | 37 | 2011 |
| Improving phylogenetic inference with a semiempirical amino acid substitution model S Zoller, A Schneider Molecular biology and evolution 30 (2), 469-479, 2012 | 27 | 2012 |
| Support patterns from different outgroups provide a strong phylogenetic signal A Schneider, GM Cannarozzi Molecular biology and evolution 26 (6), 1259-1272, 2009 | 23 | 2009 |
| Shared protein complex subunits contribute to explaining disrupted co-occurrence A Schneider, MF Seidl, B Snel PLoS Comput Biol 9 (7), e1003124, 2013 | 15 | 2013 |
| Empirical analysis of the most relevant parameters of codon substitution models S Zoller, A Schneider Journal of molecular evolution 70 (6), 605-612, 2010 | 15 | 2010 |
| A new semiempirical codon substitution model based on principal component analysis of Mammalian sequences S Zoller, A Schneider Molecular Biology and Evolution 29 (1), 271–277, 2012 | 14 | 2012 |
| SynPAM—A distance measure based on synonymous codon substitutions A Schneider, G Gonnet, G Cannarozzi IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB) 4 …, 2007 | 13 | 2007 |
| A predicted functional gene network for the plant pathogen Phytophthora infestans as a framework for genomic biology MF Seidl, A Schneider, F Govers, B Snel BMC Genomics 14 (1), 483, 2013 | 12 | 2013 |
| Fast estimation of the difference between two PAM/JTT evolutionary distances in triplets of homologous sequences C Dessimoz, M Gil, A Schneider, G Gonnet BMC bioinformatics 7 (1), 529, 2006 | 12 | 2006 |
| The Microbe browser for comparative genomics A Gattiker, C Dessimoz, A Schneider, I Xenarios, M Pagni, J Rougemont Nucleic acids research 37 (suppl 2), W296-W299, 2009 | 6 | 2009 |
| Synonymous Codon Substitution Matrices A Schneider, G Gonnet, G Cannarozzi Computational Science–ICCS 2006, 630-637, 2006 | 5 | 2006 |
| Probabilistic ancestral sequences based on the Markovian model of evolution: algorithms and applications GM Cannarozzi, A Schneider, GH Gonnet Ancestral sequence reconstruction, 58, 2007 | 4 | 2007 |
Gaston H. GonnetProfessor Emeritus of Computer Science at the ETH ZurichVerified email at inf.ethz.ch
