James H. Degnan

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Noah RosenbergStanford UniversityVerificeret mail på stanford.edu
Mattias JakobssonUppsala UniversityVerificeret mail på ebc.uu.se
Michael DeGiorgioAssociate Chair and Associate Professor, Florida Atlantic UniversityVerificeret mail på fau.edu
John RhodesProfessor of Mathematics, University of Alaska FairbanksVerificeret mail på alaska.edu
Zachary A. SzpiechDepartment of Biology, Pennsylvania State UniversityVerificeret mail på psu.edu
Elizabeth AllmanUniversity of Alaska FairbanksVerificeret mail på alaska.edu
Luay NakhlehProfessor of Computer Science and Dean of Engineering and Computing, Rice UniversityVerificeret mail på rice.edu
Laura KubatkoProfessor, The Ohio State UniversityVerificeret mail på stat.osu.edu
Tanja StadlerETH ZurichVerificeret mail på env.ethz.ch
Sha (Joe) ZhuRoche ShanghaiVerificeret mail på roche.com
David BryantUniversity of OtagoVerificeret mail på otago.ac.nz
Cuong Van ThanAxonVerificeret mail på rice.edu
Chaolong WangHuazhong University of Science and Technology, Wuhan, ChinaVerificeret mail på hust.edu.cn
Bjarki EldonVisiting researcher, Museum of Natural History, Berlin, GermanyVerificeret mail på mfn-berlin.de
Ayed R A AlanziAssociate Professor, Aljouf UniversityVerificeret mail på ju.edu.sa
Lisa HoflerUniversity of New MexicoVerificeret mail på salud.unm.edu
Brent WagnerDirector, Kidney Institute of New MexicoVerificeret mail på salud.unm.edu
Prof. Mike SteelUniversity of Canterbury, New ZealandVerificeret mail på canterbury.ac.nz
Jessica Lasky-SuBrigham and Women's HospitalVerificeret mail på channing.harvard.edu
Yuancheng WangPhD, mathematics and statistics department, Massey University, Palmerston northVerificeret mail på massey.ac.nz

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James H. Degnan

Dept. of Mathematics and Statistics, University of New Mexico

Verificeret mail på unm.edu - Startside

Statistics evolution phylogenetics coalescent theory


Titel Sortér efter henvisninger Sortér efter årstal Sortér efter titel	Citeret af Citeret af	År
Gene tree discordance, phylogenetic inference and the multispecies coalescent JH Degnan, NA Rosenberg Trends in ecology & evolution 24 (6), 332-340, 2009	1997	2009
Inconsistency of phylogenetic estimates from concatenated data under coalescence LS Kubatko, JH Degnan Systematic biology 56 (1), 17-24, 2007	1117	2007
Genotype, haplotype and copy-number variation in worldwide human populations M Jakobsson, SW Scholz, P Scheet, JR Gibbs, JM VanLiere, HC Fung, ... Nature 451 (7181), 998-1003, 2008	1041	2008
Discordance of species trees with their most likely gene trees JH Degnan, NA Rosenberg PLoS genetics 2 (5), e68, 2006	1038	2006
Gene tree distributions under the coalescent process JH Degnan, LA Salter Evolution 59 (1), 24-37, 2005	436	2005
The probability of a gene tree topology within a phylogenetic network with applications to hybridization detection Y Yu, JH Degnan, L Nakhleh PLoS Genet 8 (4), e1002660, 2012	252	2012
Coalescent histories on phylogenetic networks and detection of hybridization despite incomplete lineage sorting Y Yu, C Than, JH Degnan, L Nakhleh Systematic Biology 60 (2), 138-149, 2011	222	2011
Properties of consensus methods for inferring species trees from gene trees JH Degnan, M DeGiorgio, D Bryant, NA Rosenberg Systematic Biology 58, 35-54, 2009	172	2009
Identifying the rooted species tree from the distribution of unrooted gene trees under the coalescent ES Allman, JH Degnan, JA Rhodes Journal of mathematical biology 62, 833-862, 2011	166	2011
Comparing spatial maps of human population-genetic variation using Procrustes analysis C Wang, ZA Szpiech, JH Degnan, M Jakobsson, TJ Pemberton, JA Hardy, ... Statistical applications in genetics and molecular biology 9 (1), 2010	161	2010
Modeling hybridization under the network multispecies coalescent JH Degnan Systematic Biology 67, 786-799, 2018	114	2018
Fast and consistent estimation of species trees using supermatrix rooted triples M DeGiorgio, JH Degnan Molecular Biology and Evolution 27 (3), 552-569, 2010	86	2010
Anomalous unrooted gene trees JH Degnan Systematic Biology 62, 574-590, 2013	82	2013
Robustness to divergence time underestimation when inferring species trees from estimated gene trees M DeGiorgio, JH Degnan Systematic Biology 63, 66-82, 2014	65	2014
Coalescence-time distributions in a serial founder model of human evolutionary history M DeGiorgio, JH Degnan, NA Rosenberg Genetics 189 (2), 579-593, 2011	55	2011
Displayed Trees Do Not Determine Distinguishability Under the Network Multispecies Coalescent S Zhu, JH Degnan Systematic Biology 66, 283-298, 2017	47	2017
Species tree inference from gene splits by Unrooted STAR methods ES Allman, JH Degnan, JA Rhodes IEEE/ACM Transactions on Computational Biology and Bioinformatics 15, 337-342, 2018	43	2018
Hybrid-Lambda: simulation of multiple merger and Kingman gene genealogies in species networks and species trees S Zhu, JH Degnan, SJ Goldstien, B Eldon BMC Bioinformatics 16, 292, 2015	41	2015
The probability distribution of ranked gene trees on a species tree JH Degnan, NA Rosenberg, T Stadler Mathematical Biosciences 235, 45-55, 2012	37	2012
Determining species tree topologies from clade probabilities under the coalescent ES Allman, JH Degnan, JA Rhodes Journal of Theoretical Biology, 96-106, 2011	33	2011

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