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Shannon Clarke
Shannon Clarke
Senior Scientist, AgResearch
Verified email at agresearch.co.nz
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Cited by
Year
Salicylic acid dependent signaling promotes basal thermotolerance but is not essential for acquired thermotolerance in Arabidopsis thaliana
SM Clarke, LAJ Mur, JE Wood, IM Scott
The Plant Journal 38 (3), 432-447, 2004
3872004
Jasmonates act with salicylic acid to confer basal thermotolerance in Arabidopsis thaliana
SM Clarke, SM Cristescu, O Miersch, FJM Harren, C Wasternack, LAJ Mur
New Phytologist 182 (1), 175-187, 2009
3302009
Jasmonates act with salicylic acid to confer basal thermotolerance in Arabidopsis thaliana
SM Clarke, SM Cristescu, O Miersch, FJM Harren, C Wasternack, LAJ Mur
New Phytologist 182 (1), 175-187, 2009
3302009
Salicylate accumulation inhibits growth at chilling temperature in Arabidopsis
IM Scott, SM Clarke, JE Wood, LAJ Mur
Plant Physiology 135 (2), 1040-1049, 2004
3132004
Construction of relatedness matrices using genotyping-by-sequencing data
KG Dodds, JC McEwan, R Brauning, RM Anderson, TC van Stijn, ...
BMC genomics 16 (1), 1-15, 2015
1512015
SNPs for parentage testing and traceability in globally diverse breeds of sheep
MP Heaton, KA Leymaster, TS Kalbfleisch, JW Kijas, SM Clarke, ...
PloS one 9 (4), e94851, 2014
1322014
The tuatara genome reveals ancient features of amniote evolution
NJ Gemmell, K Rutherford, S Prost, M Tollis, D Winter, JR Macey, ...
Nature 584 (7821), 403-409, 2020
1272020
Sheep genome functional annotation reveals proximal regulatory elements contributed to the evolution of modern breeds
M Naval-Sanchez, Q Nguyen, S McWilliam, LR Porto-Neto, R Tellam, ...
Nature communications 9 (1), 859, 2018
892018
A high throughput single nucleotide polymorphism multiplex assay for parentage assignment in New Zealand sheep
SM Clarke, HM Henry, KG Dodds, TWD Jowett, TR Manley, RM Anderson, ...
PLoS One 9 (4), e93392, 2014
842014
Universal DNA methylation age across mammalian tissues
AT Lu, Z Fei, A Haghani, TR Robeck, JA Zoller, CZ Li, R Lowe, Q Yan, ...
BioRxiv, 2021.01. 18.426733, 2021
832021
Assessing accuracy of imputation using different SNP panel densities in a multi-breed sheep population
RV Ventura, SP Miller, KG Dodds, B Auvray, M Lee, M Bixley, SM Clarke, ...
Genetics Selection Evolution 48, 1-20, 2016
652016
Prediction of genomic breeding values for growth, carcass and meat quality traits in a multi-breed sheep population using a HD SNP chip
LF Brito, SM Clarke, JC McEwan, SP Miller, NK Pickering, WE Bain, ...
BMC genetics 18, 1-17, 2017
582017
Genetic parameters for various growth, carcass and meat quality traits in a New Zealand sheep population
LF Brito, JC McEwan, S Miller, W Bain, M Lee, K Dodds, SA Newman, ...
Small Ruminant Research 154, 81-91, 2017
522017
Specific requirements for cytochrome c-550 and the manganese-stabilizing protein in photoautotrophic strains of Synechocystis sp. PCC 6803 with mutations in the domain Gly-351 …
TR Morgan, JA Shand, SM Clarke, JJ Eaton-Rye
Biochemistry 37 (41), 14437-14449, 1998
501998
Mutation of Phe-363 in the photosystem II protein CP47 impairs photoautotrophic growth, alters the chloride requirement, and prevents photosynthesis in the absence of either …
SM Clarke, JJ Eaton-Rye
Biochemistry 38 (9), 2707-2715, 1999
441999
Genetic diversity of a New Zealand multi-breed sheep population and composite breeds’ history revealed by a high-density SNP chip
LF Brito, JC McEwan, SP Miller, NK Pickering, WE Bain, KG Dodds, ...
BMC genetics 18, 1-11, 2017
412017
Applications of the soil, plant and rumen microbiomes in pastoral agriculture
GT Attwood, SA Wakelin, SC Leahy, S Rowe, S Clarke, DF Chapman, ...
Frontiers in nutrition 6, 107, 2019
402019
Estimation of linkage disequilibrium and effective population size in New Zealand sheep using three different methods to create genetic maps
V Prieur, SM Clarke, LF Brito, JC McEwan, MA Lee, R Brauning, ...
BMC genetics 18 (1), 1-19, 2017
382017
Amino acid deletions in loop C of the chlorophyll a-binding protein CP47 alter the chloride requirement and/or prevent the assembly of photosystem II
SM Clarke, JJ Eaton-Rye
Plant molecular biology 44, 591-601, 2000
352000
Incidence and heritability of ovine pneumonia, and the relationship with production traits in New Zealand sheep
KM McRae, HJ Baird, KG Dodds, MJ Bixley, SM Clarke
Small Ruminant Research 145, 136-141, 2016
332016
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Articles 1–20