Muhammad Zabidi

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Alexander StarkResearch Institute of Molecular Pathology (IMP), Vienna BioCenter (VBC), Vienna, AustriaVerified email at imp.ac.at
Tomas KazmarIMP, IST AustriaVerified email at imp.ac.at
Vanja HaberleIMP - Research Institute for Molecular Pathology, ViennaVerified email at imp.ac.at
Felix MuerdterVerified email at cajalneuro.com
Ashley R WoodfinRyboDyn Inc.Verified email at rybodyn.com
Łukasz Miłosław BoryńCentre of New Technologies at University of WarsawVerified email at cent.uw.edu.pl
Carlos CaldasUniversity of CambridgeVerified email at cruk.cam.ac.uk
Pathmanathan RajaduraiMonash UniversityVerified email at monash.edu
Suet Feung ChinUniversity of CambridgeVerified email at cam.ac.uk
Jia Wern PanCancer Research MalaysiaVerified email at cancerresearch.my
Soo-Hwang TeoCancer Research MalaysiaVerified email at cancerresearch.my
Oscar M RuedaMRC Investigator, Programme Leader, MRC-Biostatistics Unit. University of CambridgeVerified email at mrc-bsu.cam.ac.uk
Stephen-John SammutGroup Leader, Institute of Cancer ResearchVerified email at icr.ac.uk
Daniel Marcel SuterProfessor of Biological SciencesVerified email at purdue.edu
Boon Keat ChongUniversity of CambridgeVerified email at cam.ac.uk
Alison M DunningCentre for Cancer Genetic Epidemiology, Dept of Oncology, University of CambridgeVerified email at medschl.cam.ac.uk
Douglas EastonProfessor of Genetic Epidemiology, University of CambridgeVerified email at medschl.cam.ac.uk
Prof. Antonis C. AntoniouProfessor of Cancer Risk Prediction, University of CambridgeVerified email at medschl.cam.ac.uk
Lai Meng LooiDistinguished Professor, University of MalayaVerified email at ummc.edu.my

Muhammad Zabidi

Roche

Verified email at roche.com

Machine Learning AWS Computational Biology Genomics


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Enhancer--core--promoter specificity separates developmental and housekeeping gene regulation MA Zabidi, CD Arnold, K Schernhuber, M Pagani, M Rath, O Frank, ... Nature 518 (7540), 556-572, 2015	460	2015
Regulatory enhancer–core-promoter communication via transcription factors and cofactors MA Zabidi, A Stark Trends in Genetics 32 (12), 801-814, 2016	217	2016
Resolving systematic errors in widely used enhancer activity assays in human cells F Muerdter, ŁM Boryń, AR Woodfin, C Neumayr, M Rath, MA Zabidi, ... Nature methods 15 (2), 141-149, 2018	157	2018
Genome-wide assessment of sequence-intrinsic enhancer responsiveness at single-base-pair resolution CD Arnold, MA Zabidi, M Pagani, M Rath, K Schernhuber, T Kazmar, ... Nature biotechnology 35 (2), 136-144, 2017	89	2017
The molecular landscape of Asian breast cancers reveals clinically relevant population-specific differences JW Pan, MMA Zabidi, PS Ng, MY Meng, SN Hasan, B Sandey, ... Nature communications 11 (1), 6433, 2020	47	2020
Microtubule-mediated Src tyrosine kinase trafficking in neuronal growth cones B Wu, B Decourt, MA Zabidi, LT Wuethrich, WH Kim, Z Zhou, K MacIsaac, ... Molecular biology of the cell 19 (11), 4611-4627, 2008	37	2008
Germline APOBEC3B deletion increases somatic hypermutation in Asian breast cancer that is associated with Her2 subtype, PIK3CA mutations and immune activation JW Pan, MMA Zabidi, BK Chong, MY Meng, PS Ng, SN Hasan, B Sandey, ... International journal of cancer 148 (10), 2489-2501, 2021	16	2021
Characterisation of PALB2 tumours through whole-exome and whole-transcriptomic analyses PS Ng, JW Pan, MM Ahmad Zabidi, P Rajadurai, CH Yip, OM Reuda, ... NPJ breast cancer 7 (1), 46, 2021	7	2021
Resolving systematic errors in widely-used enhancer activity assays in human cells enables genome-wide functional enhancer characterization F Muerdter, ŁM Boryń, AR Woodfin, C Neumayr, M Rath, MA Zabidi, ... BiorXiv, 164590, 2017	3	2017
Gene signature for predicting homologous recombination deficiency in triple-negative breast cancer J Pan, P Ng, MMA Zabidi, PN Fatin, J Teo, SN Hasan, C Yip, P Rajadurai, ...	1	2022
STARR-seq screening protocol A Stark, F Muerdter, ŁM Boryń, AR Woodfin, C Neumayr, M Rath, ...	1	2017
qPCR assay to measure ISG expression in human cells A Stark, F Muerdter, ŁM Boryń, AR Woodfin, C Neumayr, M Rath, ...	1	2017
qPCR based reporter assay on luciferase transcripts A Stark, F Muerdter, ŁM Boryń, AR Woodfin, C Neumayr, M Rath, ...	1	2017
STARR-seq library preparation A Stark, F Muerdter, ŁM Boryń, AR Woodfin, C Neumayr, M Rath, ...	1	2017
Model Routing And Robust Outlier Detection		2023
Enhancer-responsiveness and-specificity of Core Promoters in Gene Transcription MMA Zabidi		2017
Identification of four-jointed box 1 as a potential oncogene in nasopharyngeal carcinoma/Muhammad Mamduh bin Ahmad Zabidi MM Ahmad Zabidi University of Malaya, 2011		2011
A method for the assessment of cancer in a biological sample obtained from a subject		2009

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