Nicole T. Perna
Nicole T. Perna
Professor of Genetics
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Cited by
Cited by
The Complete Genome Sequence of Escherichia coli K-12
FR Blattner, G Plunkett III, CA Bloch, NT Perna, V Burland, M Riley, ...
science 277 (5331), 1453-1462, 1997
Mauve: multiple alignment of conserved genomic sequence with rearrangements
ACE Darling, B Mau, FR Blattner, NT Perna
Genome research 14 (7), 1394-1403, 2004
progressiveMauve: multiple genome alignment with gene gain, loss and rearrangement
AE Darling, B Mau, NT Perna
PloS one 5 (6), e11147, 2010
Genome sequence of enterohaemorrhagic Escherichia coli O157:H7
NT Perna, G Plunkett III, V Burland, B Mau, JD Glasner, DJ Rose, ...
Nature 409 (6819), 529-533, 2001
Extensive mosaic structure revealed by the complete genome sequence of uropathogenic Escherichia coli
RA Welch, V Burland, G Plunkett III, P Redford, P Roesch, D Rasko, ...
Proceedings of the National Academy of Sciences 99 (26), 17020-17024, 2002
Patterns of nucleotide composition at fourfold degenerate sites of animal mitochondrial genomes
NT Perna, TD Kocher
Journal of molecular evolution 41, 353-358, 1995
Genome Sequence of Yersinia pestis KIM
W Deng, V Burland, G Plunkett III, A Boutin, GF Mayhew, P Liss, NT Perna, ...
Journal of bacteriology 184 (16), 4601-4611, 2002
Escherichia coli K-12: a cooperatively developed annotation snapshot—2005
M Riley, T Abe, MB Arnaud, MKB Berlyn, FR Blattner, RR Chaudhuri, ...
Nucleic acids research 34 (1), 1-9, 2006
Reordering contigs of draft genomes using the Mauve aligner
AI Rissman, B Mau, BS Biehl, AE Darling, JD Glasner, NT Perna
Bioinformatics 25 (16), 2071-2073, 2009
Host Range and Molecular Phylogenies of the Soft Rot Enterobacterial Genera Pectobacterium and Dickeya
B Ma, ME Hibbing, HS Kim, RM Reedy, I Yedidia, J Breuer, J Breuer, ...
Phytopathology 97 (9), 1150-1163, 2007
Molecular Evolution of a Pathogenicity Island from Enterohemorrhagic Escherichia coli O157:H7
NT Perna, GF Mayhew, G Pósfai, S Elliott, MS Donnenberg, JB Kaper, ...
Infection and immunity 66 (8), 3810-3817, 1998
Complete Genome Sequence and Comparative Genomics of Shigella flexneri Serotype 2a Strain 2457T
J Wei, MB Goldberg, V Burland, MM Venkatesan, W Deng, G Fournier, ...
Infection and immunity 71 (5), 2775-2786, 2003
The complete DNA sequence and analysis of the large virulence plasmid of Escherichia coli O157:H7
V Burland, Y Shao, NT Perna, G Plunkett, FR Blattner, HJ Sofia
Nucleic acids research 26 (18), 4196-4204, 1998
The Role of Secretion Systems and Small Molecules in Soft-Rot Enterobacteriaceae Pathogenicity
A Charkowski, C Blanco, G Condemine, D Expert, T Franza, C Hayes, ...
Annual review of phytopathology 50, 425-449, 2012
Identification and Characterization of lpfABCCDE, a Fimbrial Operon of Enterohemorrhagic Escherichia coli O157:H7
AG Torres, JA Giron, NT Perna, V Burland, FR Blattner, F Avelino-Flores, ...
Infection and immunity 70 (10), 5416-5427, 2002
ASAP, a systematic annotation package for community analysis of genomes
JD Glasner, P Liss, G Plunkett III, A Darling, T Prasad, M Rusch, A Byrnes, ...
Nucleic Acids Research 31 (1), 147-151, 2003
Attaching and effacing intestinal histopathology and the locus of enterocyte effacement
JB Kaper
Escherichia coli and other Shiga toxin-producing E. coli strains, 1998
Analysis of the Lactobacillus casei supragenome and its influence in species evolution and lifestyle adaptation
JR Broadbent, EC Neeno-Eckwall, B Stahl, K Tandee, H Cai, W Morovic, ...
BMC genomics 13 (1), 1-18, 2012
Description of the Transcriptomes of Immune Response-Activated Hemocytes from the Mosquito Vectors Aedes aegypti and Armigeres subalbatus
LC Bartholomay, WL Cho, TA Rocheleau, JP Boyle, ET Beck, JF Fuchs, ...
Infection and immunity 72 (7), 4114-4126, 2004
Directed Evolution of Ionizing Radiation Resistance in Escherichia coli
DR Harris, SV Pollock, EA Wood, RJ Goiffon, AJ Klingele, EL Cabot, ...
Journal of bacteriology 191 (16), 5240-5252, 2009
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