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Stephane E Castel
Stephane E Castel
Variant Bio
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Title
Cited by
Cited by
Year
Genetic effects on gene expression across human tissues.
F Aguet, AA Brown, SE Castel, JR Davis, P Mohammadi, AV Segrè, ...
Nature 550 (7675), 204-213, 2017
33162017
The GTEx Consortium atlas of genetic regulatory effects across human tissues
GTEx Consortium
Science 369 (6509), 1318-1330, 2020
24242020
RNA interference in the nucleus: roles for small RNAs in transcription, epigenetics and beyond
SE Castel, RA Martienssen
Nature Reviews Genetics 14 (2), 100-112, 2013
11192013
Landscape of X chromosome inactivation across human tissues
T Tukiainen, AC Villani, A Yen, MA Rivas, JL Marshall, R Satija, M Aguirre, ...
Nature 550 (7675), 244-248, 2017
8302017
Dynamic landscape and regulation of RNA editing in mammals
MH Tan, Q Li, R Shanmugam, R Piskol, J Kohler, AN Young, KI Liu, ...
Nature 550 (7675), 249-254, 2017
5282017
The impact of sex on gene expression across human tissues
M Oliva, M Muñoz-Aguirre, S Kim-Hellmuth, V Wucher, ADH Gewirtz, ...
Science 369 (6509), eaba3066, 2020
4112020
Tools and best practices for data processing in allelic expression analysis
SE Castel, A Levy-Moonshine, P Mohammadi, E Banks, T Lappalainen
Genome biology 16, 1-12, 2015
3862015
A quantitative proteome map of the human body
L Jiang, M Wang, S Lin, R Jian, X Li, J Chan, G Dong, H Fang, ...
Cell 183 (1), 269-283. e19, 2020
2832020
Cell type–specific genetic regulation of gene expression across human tissues
S Kim-Hellmuth, F Aguet, M Oliva, M Muñoz-Aguirre, S Kasela, V Wucher, ...
Science 369 (6509), eaaz8528, 2020
2522020
Modified penetrance of coding variants by cis-regulatory variation contributes to disease risk
SE Castel, A Cervera, P Mohammadi, F Aguet, F Reverter, A Wolman, ...
Nature genetics 50 (9), 1327-1334, 2018
1982018
Structural basis of the oxidative activation of the carboxysomal γ-carbonic anhydrase, CcmM
KL Peña, SE Castel, C De Araujo, GS Espie, MS Kimber
Proceedings of the National Academy of Sciences 107 (6), 2455-2460, 2010
1942010
RNAi promotes heterochromatic silencing through replication-coupled release of RNA Pol II
M Zaratiegui, SE Castel, DV Irvine, A Kloc, J Ren, F Li, E De Castro, ...
Nature 479 (7371), 135-138, 2011
1712011
Genetic regulatory effects modified by immune activation contribute to autoimmune disease associations
S Kim-Hellmuth, M Bechheim, B Pütz, P Mohammadi, Y Nédélec, ...
Nature communications 8 (1), 1-10, 2017
1682017
Co-expression networks reveal the tissue-specific regulation of transcription and splicing
A Saha, Y Kim, ADH Gewirtz, B Jo, C Gao, IC McDowell, BE Engelhardt, ...
Genome research 27 (11), 1843-1858, 2017
1652017
Quantifying the regulatory effect size of cis-acting genetic variation using allelic fold change
P Mohammadi, SE Castel, AA Brown, T Lappalainen
Genome research 27 (11), 1872-1884, 2017
1352017
Transcriptomic signatures across human tissues identify functional rare genetic variation
NM Ferraro, BJ Strober, J Einson, NS Abell, F Aguet, AN Barbeira, ...
Science 369 (6509), eaaz5900, 2020
127*2020
Population-scale tissue transcriptomics maps long non-coding RNAs to complex disease
OM de Goede, DC Nachun, NM Ferraro, MJ Gloudemans, AS Rao, ...
Cell 184 (10), 2633-2648. e19, 2021
1212021
Rare variant phasing and haplotypic expression from RNA sequencing with phASER
SE Castel, P Mohammadi, WK Chung, Y Shen, T Lappalainen
Nature communications 7 (1), 12817, 2016
1202016
Dicer promotes transcription termination at sites of replication stress to maintain genome stability
SE Castel, J Ren, S Bhattacharjee, AY Chang, M Sánchez, A Valbuena, ...
Cell 159 (3), 572-583, 2014
1202014
Genetic regulatory variation in populations informs transcriptome analysis in rare disease
P Mohammadi, SE Castel, BB Cummings, J Einson, C Sousa, P Hoffman, ...
Science 366 (6463), 351-356, 2019
982019
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