| The immune landscape of cancer V Thorsson, DL Gibbs, SD Brown, D Wolf, DS Bortone, THO Yang, ... Immunity 48 (4), 812-830. e14, 2018 | 4685 | 2018 |
| Dynamics of tumor and immune responses during immune checkpoint blockade in non–small cell lung cancer V Anagnostou, PM Forde, JR White, N Niknafs, C Hruban, J Naidoo, ... Cancer research 79 (6), 1214-1225, 2019 | 277 | 2019 |
| High-throughput prediction of MHC class I and II neoantigens with MHCnuggets XM Shao, R Bhattacharya, J Huang, IKA Sivakumar, C Tokheim, L Zheng, ... Cancer immunology research 8 (3), 396-408, 2020 | 126 | 2020 |
| Next-generation sequencing of human mitochondrial reference genomes uncovers high heteroplasmy frequency MX Sosa, IKA Sivakumar, S Maragh, V Veeramachaneni, R Hariharan, ... PLoS computational biology 8 (10), e1002737, 2012 | 91 | 2012 |
| Removal of pharmaceuticals and personal care products during water recycling: microbial community structure and effects of substrate concentration KM Onesios-Barry, D Berry, JB Proescher, IKA Sivakumar, EJ Bouwer Applied and environmental microbiology 80 (8), 2440-2450, 2014 | 55 | 2014 |
| Evaluation of machine learning methods to predict peptide binding to MHC Class I proteins R Bhattacharya, A Sivakumar, C Tokheim, VB Guthrie, V Anagnostou, ... BioRxiv, 154757, 2017 | 47* | 2017 |
| Systems engineering for microscale and nanoscale technologies MAG Darrin, JL Barth CRC Press, 2011 | 19 | 2011 |
| High-throughput prediction of MHC class I and II neoantigens with MHCnuggets. Cancer Immunol Res.(2020) 8: 396–408. doi: 10.1158/2326-6066 XM Shao, R Bhattacharya, J Huang, IKA Sivakumar, C Tokheim, L Zheng, ... CIR-19-0464, 0 | 11 | |
| High-throughput prediction of MHC class I and II neoantigens with MHCnuggets. Cancer Immunol. Res. 8, 396–408 XM Shao, R Bhattacharya, J Huang, IKA Sivakumar, C Tokheim, L Zheng, ... | 7 | 2020 |
| Entity data attribution using disparate data sets JB Michel, A Hampton, A Shukla, IKA Sivakumar US Patent 10,223,429, 2019 | 7 | 2019 |
| Experimental validation of imposed safety regions for neural controlled human patient self-feeding using the modular prosthetic limb BA Wester, MP Para, A Sivakumar, MD Kutzer, KD Katyal, AD Ravitz, ... 2013 IEEE/RSJ International Conference on Intelligent Robots and Systems …, 2013 | 6 | 2013 |
| Implementing genome-informed personalized medicine in the US Air Force Medical Service via the Patient-Centered Precision Care research (PC2-Z) program P CARE Johns Hopkins APL technical digest 31 (4), 333, 2013 | 5 | 2013 |
| Entity data attribution using disparate data sets JB Michel, A Hampton, A Shukla, IKA Sivakumar US Patent 10,942,935, 2021 | 1 | 2021 |
| Stochastic optimization of electricity transmission: dynamic programming algorithms under uncertainties IKA Sivakumar Massachusetts Institute of Technology, 2002 | 1 | 2002 |
| Entity data attribution using disparate data sets JB Michel, A Hampton, A Shukla, IKA Sivakumar US Patent App. 18/236,699, 2023 | | 2023 |
| Entity data attribution using disparate data sets JB Michel, A Hampton, A Shukla, IKA Sivakumar US Patent 11,782,936, 2023 | | 2023 |
| Immunogenomic mechanisms of response and resistance to combined radiation and immunotherapy in lung cancer Z Belcaid, WS Theelen, JR White, A Sivakumar, A Balan, N Niknafs, ... Cancer Research 81 (13_Supplement), 1662-1662, 2021 | | 2021 |
| Abstract A33: High-throughput prediction of MHC Class I and Class II neoantigens with MHCnuggets XM Shao, R Bhattacharya, J Huang, A Sivakumar, C Tokheim, L Zheng, ... Cancer Immunology Research 8 (3_Supplement), A33-A33, 2020 | | 2020 |
| ctDNA and TCR dynamics predict response toimmune checkpoint blockade in non-small cell lung cancer V Anagnostou, P Forde, J Naidoo, K Marrone, V Adleff, J White, J Phallen, ... Cancer Research 78 (13_Supplement), 3668-3668, 2018 | | 2018 |
| Site Saturation Mutant Viruses Evolve Neutralizing Antibody Resistance in a Microfluidic Cell Culture System JD Evans, AE Fischer, S Wu, PM Thielen, TS Mehoke, A Sivakumar, ... Biophysical Journal 112 (3), 133a, 2017 | | 2017 |
