The rate of adaptive evolution in animal mitochondria JE James, G Piganeau, A Eyre‐Walker Molecular ecology 25 (1), 67-78, 2016 | 143 | 2016 |
Selective sweeps on novel and introgressed variation shape mimicry loci in a butterfly adaptive radiation M Moest, SM Van Belleghem, JE James, C Salazar, SH Martin, SL Barker, ... PLoS Biology 18 (2), e3000597, 2020 | 60 | 2020 |
Molecular evolutionary consequences of island colonization JE James, R Lanfear, A Eyre-Walker Genome Biology and Evolution 8 (6), 1876-1888, 2016 | 42 | 2016 |
Nearly Neutral Evolution across the Drosophila melanogaster Genome D Castellano, J James, A Eyre-Walker Molecular Biology and Evolution 35 (11), 2685-2694, 2018 | 34 | 2018 |
DNA sequence diversity and the efficiency of natural selection in animal mitochondrial DNA J James, D Castellano, A Eyre-Walker Heredity 118 (1), 88-95, 2017 | 27 | 2017 |
Inferring genome-wide correlations of mutation fitness effects between populations X Huang, AL Fortier, AJ Coffman, TJ Struck, MN Irby, JE James, ... Molecular Biology and Evolution 38 (10), 4588-4602, 2021 | 26 | 2021 |
Universal and taxon-specific trends in protein sequences as a function of age JE James, SM Willis, PG Nelson, C Weibel, LJ Kosinski, J Masel ELife 10, e57347, 2021 | 18 | 2021 |
NQMaker: Estimating time nonreversible amino acid substitution models CC Dang, BQ Minh, H McShea, J Masel, JE James, LS Vinh, R Lanfear Systematic biology 71 (5), 1110-1123, 2022 | 14 | 2022 |
Mitochondrial DNA Sequence Diversity in Mammals: a Correlation Between the Effective and Census Population Sizes J James, A Eyre-Walker Genome Biology and Evolution 20 (20), 2441–2449, 2020 | 14 | 2020 |
Differential retention of Pfam domains contributes to long-term evolutionary trends JE James, PG Nelson, J Masel Molecular Biology and Evolution 40 (4), msad073, 2023 | 3 | 2023 |
A new codon adaptation metric predicts vertebrate body size and tendency to protein disorder CA Weibel, AL Wheeler, JE James, SM Willis, J Masel BioRxiv, 2023.03. 02.530449, 2023 | 3 | 2023 |
The protein domains of vertebrate species in which selection is more effective have greater intrinsic structural disorder C Weibel, JE James, SM Willis, PG Nelson, J Masel BioRxiv, 2020.10. 15.341313, 2020 | 3 | 2020 |
Between but Not Within-Species Variation in the Distribution of Fitness Effects J James, C Kastally, KB Budde, SC González-Martínez, P Milesi, ... Molecular biology and evolution 40 (11), msad228, 2023 | 2 | 2023 |
Complex Polyploids: Origins, Genomic Composition, and Role of Introgressed Alleles JL Leal, P Milesi, E Hodkova, Q Zhou, J James, DM Eklund, T Pyhajarvi, ... bioRxiv, 2023.08. 23.553805, 2023 | | 2023 |
The effectiveness of selection in a species affects the direction of amino acid frequency evolution H McShea, C Weibel, S Wehbi, JE James, J Masel bioRxiv, 2023.02. 01.526552, 2023 | | 2023 |
Investigating the effective population size of animals JE James University of Sussex, 2018 | | 2018 |