Paul Jenkins
Paul Jenkins
Departments of Statistics & Computer Science, University of Warwick
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Cited by
Cited by
Genome-wide fine-scale recombination rate variation in Drosophila melanogaster
AH Chan, PA Jenkins, YS Song
PLoS Genetics 8 (12), e1003090, 2012
A likelihood-free inference framework for population genetic data using exchangeable neural networks
J Chan, V Perrone, J Spence, P Jenkins, S Mathieson, Y Song
Advances in neural information processing systems 31, 2018
Poisson random fields for dynamic feature models
V Perrone, PA Jenkins, D Spano, YW Teh
The Journal of Machine Learning Research, 2017
Exact simulation of the Wright–Fisher diffusion
PA Jenkins, D Spano
The Annals of Applied Probability 27 (3), 1478-1509, 2017
Importance sampling and the two-locus model with subdivided population structure
RC Griffiths, PA Jenkins, YS Song
Advances in applied probability 40 (2), 473, 2008
The effect of recurrent mutation on the frequency spectrum of a segregating site and the age of an allele
PA Jenkins, YS Song
Theoretical population biology 80 (2), 158-173, 2011
General triallelic frequency spectrum under demographic models with variable population size
PA Jenkins, JW Mueller, YS Song
Genetics 196 (1), 295-311, 2014
An asymptotic sampling formula for the coalescent with recombination
PA Jenkins, YS Song
The annals of applied probability: an official journal of the Institute of …, 2010
Closed-form two-locus sampling distributions: accuracy and universality
PA Jenkins, YS Song
Genetics 183 (3), 1087-1103, 2009
Inference from samples of DNA sequences using a two-locus model
PA Jenkins, RC Griffiths
Journal of Computational Biology 18 (1), 109-127, 2011
Computational inference beyond Kingman's coalescent
J Koskela, P Jenkins, D Spano
Journal of Applied Probability 52 (2), 519-537, 2015
Tractable diffusion and coalescent processes for weakly correlated loci
PA Jenkins, P Fearnhead, YS Song
Electronic journal of probability 20, 2015
Padé approximants and exact two-locus sampling distributions
PA Jenkins, YS Song
The Annals of Applied Probability 22 (2), 576-607, 2012
Ongoing recombination in SARS-CoV-2 revealed through genealogical reconstruction
A Ignatieva, J Hein, PA Jenkins
Molecular biology and evolution 39 (2), msac028, 2022
A coalescent dual process for a Wright–Fisher diffusion with recombination and its application to haplotype partitioning
RC Griffiths, PA Jenkins, S Lessard
Theoretical population biology 112, 126-138, 2016
Coalescent inference using serially sampled, high-throughput sequencing data from intrahost HIV infection
K Dialdestoro, JA Sibbesen, L Maretty, J Raghwani, A Gall, P Kellam, ...
Genetics 202 (4), 1449-1472, 2016
Asymptotic genealogies of interacting particle systems with an application to sequential Monte Carlo
J Koskela, PA Jenkins, AM Johansen, D Spano
The Annals of Statistics 48 (1), 560-583, 2020
Exact simulation of the sample paths of a diffusion with a finite entrance boundary
PA Jenkins
arXiv preprint arXiv:1311.5777, 2013
Genealogy-based methods for inference of historical recombination and gene flow and their application in Saccharomyces cerevisiae
PA Jenkins, YS Song, RB Brem
PloS one 7 (11), e46947, 2012
Consistency of Bayesian nonparametric inference for discretely observed jump diffusions
J Koskela, D Spano, PA Jenkins
Bernoulli 25 (3), 2183-2205, 2019
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