Elena Rivas
Elena Rivas
Molecular and Cell Biology, Harvard University
Verified email at fas.harvard.edu - Homepage
TitleCited byYear
A dynamic programming algorithm for RNA structure prediction including pseudoknots
E Rivas, SR Eddy
Journal of molecular biology 285 (5), 2053-2068, 1999
8781999
Noncoding RNA gene detection using comparative sequence analysis
E Rivas, SR Eddy
BMC bioinformatics 2 (1), 8, 2001
5842001
Computational identification of noncoding RNAs in E. coli by comparative genomics
E Rivas, RJ Klein, TA Jones, SR Eddy
Current biology 11 (17), 1369-1373, 2001
4972001
Secondary structure alone is generally not statistically significant for the detection of noncoding RNAs
E Rivas, SR Eddy
Bioinformatics 16 (7), 583-605, 2000
3552000
Location Theory, in
JL Alonso, JL Cortés, F Lesmes, P Boucaud, E Rivas
Regional development and planning, 1964
2801964
Rfam 13.0: shifting to a genome-centric resource for non-coding RNA families
I Kalvari, J Argasinska, N Quinones-Olvera, EP Nawrocki, E Rivas, ...
Nucleic acids research 46 (D1), D335-D342, 2018
2672018
The language of RNA: a formal grammar that includes pseudoknots
E Rivas, SR Eddy
Bioinformatics 16 (4), 334-340, 2000
2302000
Identification of differentially expressed small non‐coding RNAs in the legume endosymbiont Sinorhizobium meliloti by comparative genomics
C Del Val, E Rivas, O Torres‐Quesada, N Toro, JI Jiménez‐Zurdo
Molecular microbiology 66 (5), 1080-1091, 2007
1092007
A statistical test for conserved RNA structure shows lack of evidence for structure in lncRNAs
E Rivas, J Clements, SR Eddy
Nature methods 14 (1), 45-48, 2017
1022017
A range of complex probabilistic models for RNA secondary structure prediction that includes the nearest-neighbor model and more
E Rivas, R Lang, SR Eddy
RNA 18 (2), 193-212, 2012
752012
Evolutionary models for insertions and deletions in a probabilistic modeling framework
E Rivas
BMC bioinformatics 6 (1), 63, 2005
682005
Probabilistic phylogenetic inference with insertions and deletions
E Rivas, SR Eddy
PLoS computational biology 4 (9), 2008
622008
Absence of chiral fermions in the Eichten-Preskill model
MFL Golterman, DN Petcher, E Rivas
Nuclear Physics B 395 (3), 596-622, 1993
441993
Chiral Yukawa models on the lattice and decoupling
JL Alonso, P Boucaud, JL Cortés, E Rivas
Physical Review D 44 (10), 3258, 1991
271991
The four ingredients of single-sequence RNA secondary structure prediction. A unifying perspective
E Rivas
RNA biology 10 (7), 1185-1196, 2013
262013
J. Cort es, and E. Rivas
J Alonso, P Boucaud
Phys. Rev. D 44, 3258, 1991
251991
a Lattice Global Chiral Invariant Regularization of the Chiral Schwinger Model
JL Alonso, JL Cortès, E Rivas, P Bovcaud
Modern Physics Letters A 5 (04), 275-280, 1990
211990
The large Wilson-Yukawa coupling expansion
MFL Golterman, DN Petcher, E Rivas
Nuclear Physics B 377 (1-2), 405-423, 1992
191992
RNAcentral: a hub of information for non-coding RNA sequences
Nucleic acids research 47 (D1), D221-D229, 2019
182019
Parameterizing sequence alignment with an explicit evolutionary model
E Rivas, SR Eddy
BMC bioinformatics 16 (1), 406, 2015
162015
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