| Mitochondrial and nuclear accumulation of the transcription factor ATFS-1 promotes OXPHOS recovery during the UPRmt AM Nargund, CJ Fiorese, MW Pellegrino, P Deng, CM Haynes Molecular cell 58 (1), 123-133, 2015 | 412 | 2015 |
| Mitochondrial dysfunction in cancer: potential roles of ATF5 and the mitochondrial UPR P Deng, CM Haynes Seminars in cancer biology 47, 43-49, 2017 | 93 | 2017 |
| Mitochondrial UPR repression during Pseudomonas aeruginosa infection requires the bZIP protein ZIP-3 P Deng, N Uma Naresh, Y Du, LT Lamech, J Yu, LJ Zhu, ... Proceedings of the National Academy of Sciences 116 (13), 6146-6151, 2019 | 60 | 2019 |
| Forecasting influenza activity using self-adaptive AI model and multi-source data in Chongqing, China K Su, L Xu, G Li, X Ruan, X Li, P Deng, X Li, Q Li, X Chen, Y Xiong, S Lu, ... EBioMedicine 47, 284-292, 2019 | 41 | 2019 |
| The ecological basis of morphogenesis: branching patterns in swarming colonies of bacteria P Deng, L de Vargas Roditi, D Van Ditmarsch, JB Xavier New journal of physics 16 (1), 015006, 2014 | 34 | 2014 |
| Pre-training co-evolutionary protein representation via a pairwise masked language model L He, S Zhang, L Wu, H Xia, F Ju, H Zhang, S Liu, Y Xia, J Zhu, P Deng, ... arXiv preprint arXiv:2110.15527, 2021 | 25 | 2021 |
| Health-adjusted life expectancy (HALE) in Chongqing, China, 2017: An artificial intelligence and big data method estimating the burden of disease at city level X Ruan, Y Li, X Jin, P Deng, J Xu, N Li, X Li, Y Liu, Y Hu, J Xie, Y Wu, ... The Lancet Regional Health–Western Pacific 9, 2021 | 12 | 2021 |
| The mitokine quest (ion) P Deng, CM Haynes Cell Research 26 (12), 1265-1266, 2016 | 11 | 2016 |
| CREaTor: zero-shot cis-regulatory pattern modeling with attention mechanisms Y Li, F Ju, Z Chen, Y Qu, H Xia, L He, L Wu, J Zhu, B Shao, P Deng Genome Biology 24 (1), 266, 2023 | 1 | 2023 |
| Tailoring molecules for protein pockets: a transformer-based generative solution for structured-based drug design K Wu, Y Xia, Y Fan, P Deng, H Liu, L Wu, S Xie, T Wang, T Qin, TY Liu arXiv preprint arXiv:2209.06158, 2022 | 1 | 2022 |
| Target-aware Molecule Generation for Drug Design Using a Chemical Language Model Y Xia, K Wu, P Deng, R Liu, Y Zhang, H Guo, Y Cui, Q Pei, L Wu, S Xie, ... bioRxiv, 2024.01. 08.574635, 2024 | | 2024 |
| Accelerating protein engineering with fitness landscape modeling and reinforcement learning H Sun, L He, P Deng, G Liu, H Liu, C Cao, F Ju, L Wu, T Qin, TY Liu bioRxiv, 2023.11. 16.565910, 2023 | | 2023 |
