| Nontemplated nucleotide additions distinguish the small RNA composition in cells from exosomes D Koppers-Lalic, M Hackenberg, IV Bijnsdorp, MAJ van Eijndhoven, ... Cell reports 8 (6), 1649-1658, 2014 | 592 | 2014 |
| miRanalyzer: a microRNA detection and analysis tool for next-generation sequencing experiments M Hackenberg, M Sturm, D Langenberger, JM Falcon-Perez, AM Aransay Nucleic acids research 37 (suppl_2), W68-W76, 2009 | 378 | 2009 |
| miRanalyzer: an update on the detection and analysis of microRNAs in high-throughput sequencing experiments M Hackenberg, N Rodríguez-Ezpeleta, AM Aransay Nucleic acids research 39 (suppl_2), W132-W138, 2011 | 319 | 2011 |
| CpGcluster: a distance-based algorithm for CpG-island detection M Hackenberg, C Previti, PL Luque-Escamilla, P Carpena, ... BMC bioinformatics 7, 1-13, 2006 | 224 | 2006 |
| sRNAtoolbox: an integrated collection of small RNA research tools A Rueda, G Barturen, R Lebrón, C Gómez-Martín, Á Alganza, JL Oliver, ... Nucleic acids research 43 (W1), W467-W473, 2015 | 213 | 2015 |
| MirGeneDB 2.0: the metazoan microRNA complement B Fromm, D Domanska, E Hřye, V Ovchinnikov, W Kang, ... Nucleic Acids Research 48 (D1), D132-D141, 2020 | 205 | 2020 |
| TargetSpy: a supervised machine learning approach for microRNA target prediction M Sturm, M Hackenberg, D Langenberger, D Frishman BMC bioinformatics 11, 1-17, 2010 | 201 | 2010 |
| Differential expression of micro RNA s and other small RNA s in barley between water and drought conditions M Hackenberg, P Gustafson, P Langridge, BJ Shi Plant biotechnology journal 13 (1), 2-13, 2015 | 154 | 2015 |
| Sensing of latent EBV infection through exosomal transfer of 5′ pppRNA SR Baglio, MAJ van Eijndhoven, D Koppers-Lalic, J Berenguer, ... Proceedings of the National Academy of Sciences 113 (5), E587-E596, 2016 | 145 | 2016 |
| sRNAbench and sRNAtoolbox 2019: intuitive fast small RNA profiling and differential expression E Aparicio-Puerta, R Lebron, A Rueda, C Gómez-Martín, S Giannoukakos, ... Nucleic acids research 47 (W1), W530-W535, 2019 | 144 | 2019 |
| Non-invasive prostate cancer detection by measuring miRNA variants (isomiRs) in urine extracellular vesicles D Koppers-Lalic, M Hackenberg, R De Menezes, B Misovic, M Wachalska, ... Oncotarget 7 (16), 22566, 2016 | 136 | 2016 |
| Surface analysis of Dicrocoelium dendriticum. The molecular characterization of exosomes reveals the presence of miRNAs D Bernal, M Trelis, S Montaner, F Cantalapiedra, A Galiano, ... Journal of proteomics 105, 232-241, 2014 | 122 | 2014 |
| Characterization of phosphorus-regulated miR399 and miR827 and their isomirs in barley under phosphorus-sufficient and phosphorus-deficient conditions M Hackenberg, BJ Shi, P Gustafson, P Langridge BMC plant biology 13 (1), 1-17, 2013 | 114 | 2013 |
| IsoFinder: computational prediction of isochores in genome sequences JL Oliver, P Carpena, M Hackenberg, P Bernaola-Galván Nucleic acids research 32 (suppl_2), W287-W292, 2004 | 111 | 2004 |
| A comprehensive expression profile of microRNAs and other classes of non-coding small RNAs in barley under phosphorous-deficient and-sufficient conditions M Hackenberg, POJ Huang, CY Huang, BUJUN Shi, P Gustafson, ... DNA research 20 (2), 109-125, 2013 | 101 | 2013 |
| Level statistics of words: Finding keywords in literary texts and symbolic sequences P Carpena, P Bernaola-Galván, M Hackenberg, AV Coronado, JL Oliver Physical Review E 79 (3), 035102, 2009 | 101 | 2009 |
| sRNAbench: profiling of small RNAs and its sequence variants in single or multi-species high-throughput experiments G Barturen, A Rueda, M Hamberg, A Alganza, R Lebron, M Kotsyfakis, ... Methods in Next Generation Sequencing 1 (1), 21-31, 2014 | 92 | 2014 |
| A systems level analysis reveals transcriptomic and proteomic complexity in Ixodes ricinus midgut and salivary glands during early attachment and feeding A Schwarz, S Tenzer, M Hackenberg, J Erhart, A Gerhold-Ay, J Mazur, ... Molecular & Cellular Proteomics 13 (10), 2725-2735, 2014 | 87 | 2014 |
| Isochore chromosome maps of the human genome JL Oliver, P Carpena, R Román-Roldán, T Mata-Balaguer, ... Gene 300 (1-2), 117-127, 2002 | 76 | 2002 |
| The revised microRNA complement of Fasciola hepatica reveals a plethora of overlooked microRNAs and evidence for enrichment of immuno-regulatory microRNAs in extracellular vesicles B Fromm, M Trelis, M Hackenberg, F Cantalapiedra, D Bernal, A Marcilla International journal for parasitology 45 (11), 697-702, 2015 | 64 | 2015 |
Jose L. OliverProfessor of Genetics, University of Granada, SpainVerified email at ugr.es
