Multi-site assessment of the precision and reproducibility of multiple reaction monitoring–based measurements of proteins in plasma TA Addona, SE Abbatiello, B Schilling, SJ Skates, DR Mani, DM Bunk, ... Nature biotechnology 27 (7), 633-641, 2009 | 1149 | 2009 |
Integrated proteogenomic characterization of human high-grade serous ovarian cancer H Zhang, T Liu, Z Zhang, SH Payne, B Zhang, JE McDermott, JY Zhou, ... Cell 166 (3), 755-765, 2016 | 895 | 2016 |
Repeatability and reproducibility in proteomic identifications by liquid chromatography− tandem mass spectrometry DL Tabb, L Vega-Montoto, PA Rudnick, AM Variyath, AJL Ham, DM Bunk, ... Journal of proteome research 9 (2), 761-776, 2010 | 630 | 2010 |
Proteogenomic analysis of human colon cancer reveals new therapeutic opportunities S Vasaikar, C Huang, X Wang, VA Petyuk, SR Savage, B Wen, Y Dou, ... Cell 177 (4), 1035-1049. e19, 2019 | 573 | 2019 |
Depletion of abundant plasma proteins and limitations of plasma proteomics C Tu, PA Rudnick, MY Martinez, KL Cheek, SE Stein, RJC Slebos, ... Journal of proteome research 9 (10), 4982-4991, 2010 | 404 | 2010 |
Proteogenomic landscape of breast cancer tumorigenesis and targeted therapy K Krug, EJ Jaehnig, S Satpathy, L Blumenberg, A Karpova, M Anurag, ... Cell 183 (5), 1436-1456. e31, 2020 | 313 | 2020 |
Metabolite profiling of a NIST Standard Reference Material for human plasma (SRM 1950): GC-MS, LC-MS, NMR, and clinical laboratory analyses, libraries, and web-based resources Y Simón-Manso, MS Lowenthal, LE Kilpatrick, ML Sampson, KH Telu, ... Analytical chemistry 85 (24), 11725-11731, 2013 | 280 | 2013 |
Performance metrics for liquid chromatography-tandem mass spectrometry systems in proteomics analyses PA Rudnick, KR Clauser, LE Kilpatrick, DV Tchekhovskoi, P Neta, ... Molecular & Cellular Proteomics 9 (2), 225-241, 2010 | 202 | 2010 |
Large-scale interlaboratory study to develop, analytically validate and apply highly multiplexed, quantitative peptide assays to measure cancer-relevant proteins in plasma SE Abbatiello, B Schilling, DR Mani, LJ Zimmerman, SC Hall, B MacLean, ... Molecular & Cellular Proteomics 14 (9), 2357-2374, 2015 | 194 | 2015 |
Interlaboratory study characterizing a yeast performance standard for benchmarking LC-MS platform performance AG Paulovich, D Billheimer, AJL Ham, L Vega-Montoto, PA Rudnick, ... Molecular & Cellular Proteomics 9 (2), 242-254, 2010 | 184 | 2010 |
Characterization of the human salivary proteome by capillary isoelectric focusing/nanoreversed-phase liquid chromatography coupled with ESI-tandem MS T Guo, PA Rudnick, W Wang, CS Lee, DL DeVoe, BM Balgley Journal of proteome research 5 (6), 1469-1478, 2006 | 184 | 2006 |
Proteome analysis of microdissected formalin-fixed and paraffin-embedded tissue specimens T Guo, W Wang, PA Rudnick, T Song, J Li, Z Zhuang, RJ Weil, DL DeVoe, ... Journal of Histochemistry & Cytochemistry 55 (7), 763-772, 2007 | 151 | 2007 |
Design, implementation and multisite evaluation of a system suitability protocol for the quantitative assessment of instrument performance in liquid chromatography-multiple … SE Abbatiello, DR Mani, B Schilling, B MacLean, LJ Zimmerman, X Feng, ... Molecular & Cellular Proteomics 12 (9), 2623-2639, 2013 | 125 | 2013 |
A description of the clinical proteomic tumor analysis consortium (CPTAC) common data analysis pipeline PA Rudnick, SP Markey, J Roth, Y Mirokhin, X Yan, DV Tchekhovskoi, ... Journal of proteome research 15 (3), 1023-1032, 2016 | 117 | 2016 |
Integrated proteomic and glycoproteomic characterization of human high-grade serous ovarian carcinoma Y Hu, J Pan, P Shah, M Ao, SN Thomas, Y Liu, L Chen, M Schnaubelt, ... Cell reports 33 (3), 2020 | 98 | 2020 |
Proteome analysis of microdissected tumor tissue using a capillary isoelectric focusing-based multidimensional separation platform coupled with ESI-tandem MS Y Wang, PA Rudnick, EL Evans, J Li, Z Zhuang, DL DeVoe, CS Lee, ... Analytical chemistry 77 (20), 6549-6556, 2005 | 97 | 2005 |
Comprehensive analysis of protein digestion using six trypsins reveals the origin of trypsin as a significant source of variability in proteomics SJ Walmsley, PA Rudnick, Y Liang, Q Dong, SE Stein, AI Nesvizhskii Journal of proteome research 12 (12), 5666-5680, 2013 | 83 | 2013 |
Characterization of the glnK-amtB Operon of Azotobacter vinelandii D Meletzus, P Rudnick, N Doetsch, A Green, C Kennedy Journal of bacteriology 180 (12), 3260-3264, 1998 | 82 | 1998 |
Genus III. Azotobacter Beijerinck 1901, 567^ C Kennedy Bergey's manual of systematic bacteriology 2, 384-389, 2005 | 77* | 2005 |
Role of GlnK in NifL-Mediated Regulation of NifA Activity in Azotobacter vinelandii P Rudnick, C Kunz, MK Gunatilaka, ER Hines, C Kennedy Journal of bacteriology 184 (3), 812-820, 2002 | 71 | 2002 |