Michael Charleston

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Stephen J. SimpsonThe University of SydneyVerified email at sydney.edu.au
Scott CarverAssociate Professor, Wildlife Ecology, University of TasmaniaVerified email at utas.edu.au
Roderic D. M. PageProfessor of Taxonomy, SBOHVM, University of GlasgowVerified email at bio.gla.ac.uk
David RaubenheimerCharles Perkins Centre, University of SydneyVerified email at sydney.edu.au
Joshua Wing Kei HoAssociate Professor, The University of Hong KongVerified email at hku.hk
Jerome BuhlSenior Lecturer. The University of AdelaideVerified email at adelaide.edu.au
Mathieu LihoreauCNRS Research Director, CRCA-CBI (Univ. Toulouse)Verified email at univ-tlse3.fr
Edward C HolmesUniversity of SydneyVerified email at sydney.edu.au
Cris dos RemediosProfessor, Discipline of Anatomy, University of SydneyVerified email at sydney.edu.au
Nick Fountain-JonesUniversity of TasmaniaVerified email at utas.edu.au
Michael HendyProfessor, Mathematics, Otago UniversityVerified email at maths.otago.ac.nz
Benjamin DrinkwaterUniversity of SydneyVerified email at sydney.edu.au
Oliver PybusUniversity of Oxford / Royal Veterinary CollegeVerified email at zoo.ox.ac.uk
Andrew RambautProfessor of Molecular Evolution, University of EdinburghVerified email at ed.ac.uk
Fiona J ClissoldThe University of SydneyVerified email at sydney.edu.au
David PennyProfessor of theoretical Biology, Massey UniversityVerified email at massey.ac.nz
Jennifer Hoyal CuthillIADS Research Fellow, University of EssexVerified email at essex.ac.uk
Alistair M SeniorSenior Research Fellow, The University of SydneyVerified email at sydney.edu.au
Gregory SwordRegents Professor and Charles R. Parencia Chair of Cotton Entomology, Texas A&M UniversityVerified email at tamu.edu
Adam PolkinghorneUniversity of the Sunshine CoastVerified email at usc.edu.au

Michael Charleston

University of Tasmania

Verified email at utas.edu.au

Evolution Coevolution Cophylogeny Bioinformatics Systems Biology


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The epidemic behavior of the hepatitis C virus OG Pybus, MA Charleston, S Gupta, A Rambaut, EC Holmes, PH Harvey Science 292 (5525), 2323-2325, 2001	541	2001
From gene to organismal phylogeny: reconciled trees and the gene tree/species tree problem RDM Page, MA Charleston Molecular Phylogenetics and Evolution 7 (2), 231-240, 1997	512	1997
Trees within trees: phylogeny and historical associations RDM Page, MA Charleston Trends in Ecology & Evolution 13 (9), 356-359, 1998	402	1998
Jungles: a new solution to the host/parasite phylogeny reconciliation problem MA Charleston Mathematical Biosciences 149 (2), 191-223, 1998	340	1998
Preferential host switching by primate lentiviruses can account for phylogenetic similarity with the primate phylogeny MA Charleston, DL Robertson Systematic Biology 51 (3), 528-535, 2002	280	2002
Insights into the evolutionary history of an emerging livestock pathogen: porcine circovirus 2 C Firth, MA Charleston, S Duffy, B Shapiro, EC Holmes Journal of virology 83 (24), 12813-12821, 2009	277	2009
Hantavirus evolution in relation to its rodent and insectivore hosts: no evidence for codivergence C Ramsden, EC Holmes, MA Charleston Molecular Biology and Evolution 26 (1), 143-153, 2009	250	2009
Host Switch Leads to Emergence of Plasmodium vivax Malaria in Humans J Mu, DA Joy, J Duan, Y Huang, J Carlton, J Walker, J Barnwell, P Beerli, ... Molecular biology and evolution 22 (8), 1686-1693, 2005	243	2005
Mathematical elegance with biochemical realism: the covarion model of molecular evolution. D Penny, BJ McComish, MA Charleston, MD Hendy Journal of Molecular Evolution 53 (6), 2001	210	2001
Fungal identification using a Bayesian classifier and the Warcup training set of internal transcribed spacer sequences V Deshpande, Q Wang, P Greenfield, M Charleston, A Porras-Alfaro, ... Mycologia 108 (1), 1-5, 2016	180	2016
Differential variability analysis of gene expression and its application to human diseases JWK Ho, M Stefani, CG Dos Remedios, MA Charleston Bioinformatics 24 (13), i390-i398, 2008	168	2008
Modelling nutritional interactions: from individuals to communities SJ Simpson, D Raubenheimer, MA Charleston, FJ Clissold Trends in Ecology & Evolution 25 (1), 53-60, 2010	141	2010
A cophylogenetic perspective of RNA–virus evolution AP Jackson, MA Charleston Molecular Biology and Evolution 21 (1), 45-57, 2004	139	2004
A covariotide model explains apparent phylogenetic structure of oxygenic photosynthetic lineages. PJ Lockhart, MA Steel, AC Barbrook, DH Huson, MA Charleston, ... Molecular Biology and Evolution 15 (9), 1183-1188, 1998	132	1998
Reconciled trees and incongruent gene and species trees RDM Page, MA Charleston Mathematical Hierarchies in Biology 37, 57-70, 1997	125	1997
Nutritional ecology beyond the individual: a conceptual framework for integrating nutrition and social interactions M Lihoreau, J Buhl, MA Charleston, GA Sword, D Raubenheimer, ... Ecology letters 18 (3), 273-286, 2015	114	2015
Traversing the tangle: algorithms and applications for cophylogenetic studies MA Charleston, SL Perkins Journal of Biomedical Informatics 39 (1), 62-71, 2006	88	2006
On the computational complexity of the reticulate cophylogeny reconstruction problem R Libeskind-Hadas, MA Charleston Journal of Computational Biology 16 (1), 105-117, 2009	78	2009
TreeEdit: phylogenetic tree editor v. 1.0 alpha 10 A Rambaut, M Charleston See http://evolve.zoo.ox.ac.uk/software/TreeEdit/main.html, 2002	69	2002
TreeEdit: phylogenetic tree editor A Rambaut, M Charleston Program distributed by the authors http://evolve zoo ox ac uk/software …, 2002	65*	2002

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