Michael C. Schatz

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Citations	36411	21432
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i10-index	146	136

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Fritz J SedlazeckHuman Genome Sequencing Center, Baylor College of Medicine, One Baylor Plaza, Houston TX 77030Verified email at bcm.edu
Maria NattestadGoogleVerified email at google.com
Han FangResearch Scientist Manager, Meta AIVerified email at fb.com
Giuseppe NarzisiLead Bioinformatics Scientist, New York Genome CenterVerified email at nygenome.org
Srividya RamakrishnanSenior Research Data Analyst, Schatz Lab , Johns Hopkins UniversityVerified email at jhu.edu
Melanie KirscheJohns Hopkins UniversityVerified email at jhu.edu
Michael AlongePh.D. Student, Johns Hopkins UniversityVerified email at jh.edu
Charlotte A DarbyTakeda PharmaceuticalsVerified email at jhu.edu
Ruibang LuoUniversity of Hong KongVerified email at cs.hku.hk
Sergey AganezovGenomic Applications at Oxford Nanopore Technologies, IncVerified email at nanoporetech.com
Timothy Rhyker Ranallo-BenavidezUniversity of North Carolina at CharlotteVerified email at uncc.edu
Robert AboukhalilBioinformatics Software EngineerVerified email at cshl.edu
Sam KovakaJohns Hopkins UniversityVerified email at jhu.edu
Rachel M ShermanIllumina IncVerified email at illumina.com
Michael E G SauriaResearch Scientist, Johns Hopkins UniversityVerified email at jh.edu
Arun DasComputer Science PhD Student, Johns Hopkins UniversityVerified email at jhu.edu
Samantha ZarateGraduate Student, Johns Hopkins UniversityVerified email at alumni.stanford.edu
Margaret StarostikJohns Hopkins UniversityVerified email at jhu.edu
Dave ClementsGalaxy Project, Johns Hopkins University
Enis AfganResearch Scientist, Johns Hopkins UniversityVerified email at jhu.edu

Michael C. Schatz

Bloomberg Distinguished Professor, Johns Hopkins University

Verified email at cs.jhu.edu - Homepage

Computer Science Computational Biology Bioinformatics Genomics Epigenomics


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Evolution of genes and genomes on the Drosophila phylogeny AG Clark, L Pachter Nature 450 (7167), 203-218, 2007	2062	2007
The contribution of de novo coding mutations to autism spectrum disorder I Iossifov, BJ O'Roak, SJ Sanders, M Ronemus, N Krumm, D Levy, ... Nature 515, 216-21, 2014	2038	2014
De novo gene disruptions in children on the autistic spectrum I Iossifov, M Ronemus, D Levy, Z Wang, I Hakker, J Rosenbaum, ... Neuron 74 (2), 285-299, 2012	1453	2012
Big data: astronomical or genomical? ZD Stephens, SY Lee, F Faghri, RH Campbell, C Zhai, MJ Efron, R Iyer, ... PLoS biology 13 (7), e1002195, 2015	1332	2015
Phased diploid genome assembly with single-molecule real-time sequencing CS Chin, P Peluso, FJ Sedlazeck, M Nattestad, GT Concepcion, A Clum, ... Nature methods 13 (12), 1050-1054, 2016	1276	2016
A whole-genome assembly of the domestic cow, Bos taurus AV Zimin, AL Delcher, L Florea, DR Kelley, MC Schatz, D Puiu, ... Genome biology 10 (4), 1-10, 2009	1260	2009
Genome Sequence of Aedes aegypti, a Major Arbovirus Vector V Nene, JR Wortman, D Lawson, B Haas, C Kodira, Z Tu, B Loftus, Z Xi, ... Science 316 (5832), 1718-1723, 2007	1233	2007
The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus) R Ming, S Hou, Y Feng, Q Yu, A Dionne-Laporte, JH Saw, P Senin, ... Nature, 991-996, 2008	1148	2008
Hybrid error correction and de novo assembly of single-molecule sequencing reads S Koren, MC Schatz, BP Walenz, J Martin, JT Howard, G Ganapathy, ... Nature biotechnology 30 (7), 693-700, 2012	1066	2012
Draft Genome Sequence of the Sexually Transmitted Pathogen Trichomonas vaginalis JM Carlton, RP Hirt, JC Silva, AL Delcher, M Schatz, Q Zhao, JR Wortman, ... Science 315 (5809), 207-212, 2007	921	2007
CloudBurst: highly sensitive read mapping with MapReduce MC Schatz Bioinformatics 25 (11), 1363-1369, 2009	899	2009
GAGE: A critical evaluation of genome assemblies and assembly algorithms SL Salzberg, AM Phillippy, A Zimin, D Puiu, T Magoc, S Koren, ... Genome research 22 (3), 557-567, 2012	805	2012
Accurate detection of complex structural variations using single-molecule sequencing FJ Sedlazeck, P Rescheneder, M Smolka, H Fang, M Nattestad, ... Nature methods 15 (6), 461-468, 2018	793	2018
GenomeScope: fast reference-free genome profiling from short reads GW Vurture, FJ Sedlazeck, M Nattestad, CJ Underwood, H Fang, ... Bioinformatics 33 (14), 2202-2204, 2017	753	2017
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species KR Bradnam, JN Fass, A Alexandrov, P Baranay, M Bechner, I Birol, ... GigaScience 2 (1), 2047-217X-2-10, 2013	717	2013
Quake: quality-aware detection and correction of sequencing errors DR Kelley, MC Schatz, SL Salzberg Genome biology 11 (11), 1-13, 2010	684	2010
Draft genome of the filarial nematode parasite Brugia malayi E Ghedin, S Wang, D Spiro, E Caler, Q Zhao, J Crabtree, JE Allen, ... Science 317 (5845), 1756-1760, 2007	683	2007
Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome AM Wenger, P Peluso, WJ Rowell, PC Chang, RJ Hall, GT Concepcion, ... Nature biotechnology 37 (10), 1155-1162, 2019	657	2019
Major Structural Differences and Novel Potential Virulence Mechanisms from the Genomes of Multiple Campylobacter Species DE Fouts, EF Mongodin, RE Mandrell, WG Miller, DA Rasko, J Ravel, ... PLoS biology 3 (1), e15, 2005	645	2005
KBase: the United States department of energy systems biology knowledgebase AP Arkin, RW Cottingham, CS Henry, NL Harris, RL Stevens, S Maslov, ... Nature biotechnology 36 (7), 566-569, 2018	642	2018

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