Michael C. Schatz

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Citations	44995	26796
h-index	85	74
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Fritz J SedlazeckHuman Genome Sequencing Center, Baylor College of Medicine, One Baylor Plaza, Houston TX 77030Verified email at bcm.edu
Maria NattestadGoogleVerified email at google.com
Han FangGenAI, MetaVerified email at fb.com
Srividya RamakrishnanSenior Research Data Analyst, Schatz Lab , Johns Hopkins UniversityVerified email at jhu.edu
Giuseppe NarzisiLead Bioinformatics Scientist, New York Genome CenterVerified email at nygenome.org
Michael AlongePh.D. Student, Johns Hopkins UniversityVerified email at jh.edu
Melanie KirscheJohns Hopkins UniversityVerified email at jhu.edu
Sergey AganezovGenomic Applications at Oxford Nanopore Technologies, IncVerified email at nanoporetech.com
Sam KovakaJohns Hopkins UniversityVerified email at jhu.edu
Rachel M ShermanIllumina IncVerified email at illumina.com
Timothy Rhyker Ranallo-BenavidezTranslational Genomics Research InstituteVerified email at tgen.org
Ruibang LuoComputer Science, University of Hong KongVerified email at cs.hku.hk
Robert AboukhalilBioinformatics Software EngineerVerified email at chanzuckerberg.com
Shujun OuOhio State UniversityVerified email at osu.edu
Michael E G SauriaResearch Scientist, Johns Hopkins UniversityVerified email at jh.edu
Samantha ZarateRegeneron Genetics CenterVerified email at alumni.stanford.edu
Arun DasComputer Science PhD Student, Johns Hopkins UniversityVerified email at jhu.edu
Enis AfganResearch Scientist, Johns Hopkins UniversityVerified email at jhu.edu
Aysam Guerlerwww.guerler.orgVerified email at guerler.org
Stephen MosherJohns Hopkins UniversityVerified email at jhu.edu

Michael C. Schatz

Bloomberg Distinguished Professor, Johns Hopkins University

Verified email at cs.jhu.edu - Homepage

Computer Science Computational Biology Bioinformatics Genomics Epigenomics


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The contribution of de novo coding mutations to autism spectrum disorder I Iossifov, BJ O'Roak, SJ Sanders, M Ronemus, N Krumm, D Levy, ... Nature 515, 216-21, 2014	2434	2014
Evolution of genes and genomes on the Drosophila phylogeny AG Clark, L Pachter Nature 450 (7167), 203-218, 2007	2216	2007
De novo gene disruptions in children on the autistic spectrum I Iossifov, M Ronemus, D Levy, Z Wang, I Hakker, J Rosenbaum, ... Neuron 74 (2), 285-299, 2012	1598	2012
Phased diploid genome assembly with single-molecule real-time sequencing CS Chin, P Peluso, FJ Sedlazeck, M Nattestad, GT Concepcion, A Clum, ... Nature methods 13 (12), 1050-1054, 2016	1596	2016
Big data: astronomical or genomical? ZD Stephens, SY Lee, F Faghri, RH Campbell, C Zhai, MJ Efron, R Iyer, ... PLoS biology 13 (7), e1002195, 2015	1570	2015
The complete sequence of a human genome S Nurk, S Koren, A Rhie, M Rautiainen, AV Bzikadze, A Mikheenko, ... Science 376 (6588), 44-53, 2022	1375	2022
A whole-genome assembly of the domestic cow, Bos taurus AV Zimin, AL Delcher, L Florea, DR Kelley, MC Schatz, D Puiu, ... Genome biology 10, 1-10, 2009	1336	2009
Genome Sequence of Aedes aegypti, a Major Arbovirus Vector V Nene, JR Wortman, D Lawson, B Haas, C Kodira, Z Tu, B Loftus, Z Xi, ... Science 316 (5832), 1718-1723, 2007	1307	2007
The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus) R Ming, S Hou, Y Feng, Q Yu, A Dionne-Laporte, JH Saw, P Senin, ... Nature, 991-996, 2008	1215	2008
Hybrid error correction and de novo assembly of single-molecule sequencing reads S Koren, MC Schatz, BP Walenz, J Martin, JT Howard, G Ganapathy, ... Nature biotechnology 30 (7), 693-700, 2012	1166	2012
Accurate detection of complex structural variations using single-molecule sequencing FJ Sedlazeck, P Rescheneder, M Smolka, H Fang, M Nattestad, ... Nature methods 15 (6), 461-468, 2018	1145	2018
Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome AM Wenger, P Peluso, WJ Rowell, PC Chang, RJ Hall, GT Concepcion, ... Nature biotechnology 37 (10), 1155-1162, 2019	1117	2019
GenomeScope: fast reference-free genome profiling from short reads GW Vurture, FJ Sedlazeck, M Nattestad, CJ Underwood, H Fang, ... Bioinformatics 33 (14), 2202-2204, 2017	1089	2017
Draft Genome Sequence of the Sexually Transmitted Pathogen Trichomonas vaginalis JM Carlton, RP Hirt, JC Silva, AL Delcher, M Schatz, Q Zhao, JR Wortman, ... Science 315 (5809), 207-212, 2007	977	2007
KBase: the United States department of energy systems biology knowledgebase AP Arkin, RW Cottingham, CS Henry, NL Harris, RL Stevens, S Maslov, ... Nature biotechnology 36 (7), 566-569, 2018	974	2018
CloudBurst: highly sensitive read mapping with MapReduce MC Schatz Bioinformatics 25 (11), 1363-1369, 2009	918	2009
GAGE: A critical evaluation of genome assemblies and assembly algorithms SL Salzberg, AM Phillippy, A Zimin, D Puiu, T Magoc, S Koren, ... Genome research 22 (3), 557-567, 2012	870	2012
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species KR Bradnam, JN Fass, A Alexandrov, P Baranay, M Bechner, I Birol, ... Gigascience 2 (1), 2047-217X-2-10, 2013	772	2013
Quake: quality-aware detection and correction of sequencing errors DR Kelley, MC Schatz, SL Salzberg Genome biology 11 (11), 1-13, 2010	714	2010
Draft genome of the filarial nematode parasite Brugia malayi E Ghedin, S Wang, D Spiro, E Caler, Q Zhao, J Crabtree, JE Allen, ... Science 317 (5845), 1756-1760, 2007	709	2007

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