Salvador Capella-Gutiérrez
Salvador Capella-Gutiérrez
Barcelona Supercomputing Centre (BSC)
Verified email at bsc.es - Homepage
Title
Cited by
Cited by
Year
trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
S Capella-Gutiérrez, JM Silla-Martínez, T Gabaldón
Bioinformatics 25 (15), 1972-1973, 2009
44482009
Whole-genome analyses resolve early branches in the tree of life of modern birds
ED Jarvis, S Mirarab, AJ Aberer, B Li, P Houde, C Li, SYW Ho, ...
Science 346 (6215), 1320-1331, 2014
14752014
The genome of melon (Cucumis melo L.)
J Garcia-Mas, A Benjak, W Sanseverino, M Bourgeois, G Mir, ...
Proceedings of the National Academy of Sciences 109 (29), 11872-11877, 2012
5562012
The genome of the recently domesticated crop plant sugar beet (Beta vulgaris)
JC Dohm, AE Minoche, D Holtgräwe, S Capella-Gutiérrez, F Zakrzewski, ...
Nature 505 (7484), 546-549, 2014
4242014
Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida
J Collén, B Porcel, W Carré, SG Ball, C Chaparro, T Tonon, T Barbeyron, ...
Proceedings of the National Academy of Sciences 110 (13), 5247-5252, 2013
2862013
Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs
RE Green, EL Braun, J Armstrong, D Earl, N Nguyen, G Hickey, ...
Science 346 (6215), 2014
2792014
PhylomeDB v4: zooming into the plurality of evolutionary histories of a genome
J Huerta-Cepas, S Capella-Gutiérrez, LP Pryszcz, M Marcet-Houben, ...
Nucl. Acids Res. 42 (D1), D897-D902, 2014
2152014
The First Myriapod Genome Sequence Reveals Conservative Arthropod Gene Content and Genome Organisation in the Centipede Strigamia maritima
AD Chipman, DEK Ferrier, C Brena, J Qu, DST Hughes, R Schröder, ...
PLoS biology 12 (11), e1002005, 2014
2042014
Phylogenomics supports microsporidia as the earliest diverging clade of sequenced fungi
S Capella-Gutiérrez, M Marcet-Houben, T Gabaldon
BMC biology 10 (1), 1-14, 2012
1942012
Phylemon 2.0: a suite of web-tools for molecular evolution, phylogenetics, phylogenomics and hypotheses testing
R Sánchez, F Serra, J Tárraga, I Medina, J Carbonell, L Pulido, ...
Nucleic acids research 39 (suppl_2), W470-W474, 2011
1752011
PhylomeDB v3. 0: an expanding repository of genome-wide collections of trees, alignments and phylogeny-based orthology and paralogy predictions
J Huerta-Cepas, S Capella-Gutierrez, LP Pryszcz, I Denisov, D Kormes, ...
Nucleic acids research 39 (suppl_1), D556-D560, 2010
1722010
Standardized benchmarking in the quest for orthologs
AM Altenhoff, B Boeckmann, S Capella-Gutierrez, DA Dalquen, T DeLuca, ...
Nature methods 13 (5), 425-430, 2016
1702016
Genome and transcriptome analysis of the Mesoamerican common bean and the role of gene duplications in establishing tissue and temporal specialization of genes
A Vlasova, S Capella-Gutiérrez, M Rendón-Anaya, M Hernández-Oñate, ...
Genome biology 17 (1), 1-18, 2016
1482016
The Solanum commersonii Genome Sequence Provides Insights into Adaptation to Stress Conditions and Genome Evolution of Wild Potato Relatives
R Aversano, F Contaldi, MR Ercolano, V Grosso, M Iorizzo, F Tatino, ...
The Plant Cell 27 (4), 954-968, 2015
1162015
Genomic history of the origin and domestication of common bean unveils its closest sister species
M Rendón-Anaya, JM Montero-Vargas, S Saburido-Álvarez, A Vlasova, ...
Genome biology 18 (1), 1-17, 2017
1012017
Extreme genomic erosion after recurrent demographic bottlenecks in the highly endangered Iberian lynx
F Abascal, A Corvelo, F Cruz, JL Villanueva-Cañas, A Vlasova, ...
Genome biology 17 (1), 1-19, 2016
912016
Four simple recommendations to encourage best practices in research software
RC Jiménez, M Kuzak, M Alhamdoosh, M Barker, B Batut, M Borg, ...
F1000Research 6, 2017
752017
Ten steps to get started in Genome Assembly and Annotation
VD Del Angel, E Hjerde, L Sterck, S Capella-Gutierrez, C Notredame, ...
F1000Research 7, 2018
742018
Towards FAIR principles for research software
AL Lamprecht, L Garcia, M Kuzak, C Martinez, R Arcila, E Martin Del Pico, ...
Data Science 3 (1), 37-59, 2020
552020
From community approaches to single-cell genomics: the discovery of ubiquitous hyperhalophilic Bacteroidetes generalists
M Gomariz, M Martínez-García, F Santos, F Rodriguez, ...
The ISME journal 9 (1), 16-31, 2015
472015
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