James A Gagnon
James A Gagnon
Assistant Professor - University of Utah
Verified email at utah.edu - Homepage
TitleCited byYear
CHOPCHOP: a CRISPR/Cas9 and TALEN web tool for genome editing
TG Montague, JM Cruz, JA Gagnon, GM Church, E Valen
Nucleic acids research 42 (W1), W401-W407, 2014
5932014
Efficient mutagenesis by Cas9 protein-mediated oligonucleotide insertion and large-scale assessment of single-guide RNAs
JA Gagnon, E Valen, SB Thyme, P Huang, L Ahkmetova, A Pauli, ...
PLoS One 9 (5), e98186, 2014
4892014
CHOPCHOP v2: a web tool for the next generation of CRISPR genome engineering
K Labun, TG Montague, JA Gagnon, SB Thyme, E Valen
Nucleic acids research 44 (W1), W272-W276, 2016
3612016
Toddler: an embryonic signal that promotes cell movement via Apelin receptors
A Pauli, ML Norris, E Valen, GL Chew, JA Gagnon, S Zimmerman, ...
Science 343 (6172), 1248636, 2014
3122014
Whole organism lineage tracing by combinatorial and cumulative genome editing
A McKenna, G Findlay, JA Gagnon, M Horwitz, AF Schier, J Shendure
Science 353 (6298), aaf7907, 2016
2902016
Osteoblast differentiation and skeletal development are regulated by Mdm2–p53 signaling
CJ Lengner, HA Steinman, J Gagnon, TW Smith, JE Henderson, ...
The Journal of cell biology 172 (6), 909-921, 2006
2432006
Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain
B Raj, DE Wagner, A McKenna, S Pandey, AM Klein, J Shendure, ...
Nature biotechnology 36 (5), 442-450, 2018
1622018
Efficient CRISPR-Cas9-mediated generation of knockin human pluripotent stem cells lacking undesired mutations at the targeted locus
FT Merkle, WM Neuhausser, D Santos, E Valen, JA Gagnon, K Maas, ...
Cell reports 11 (6), 875-883, 2015
1112015
Multiple Kinesin Motors Coordinate Cytoplasmic RNA Transport on a Subpopulation of Microtubules in Xenopus Oocytes
TJ Messitt, JA Gagnon, JA Kreiling, CA Pratt, YJ Yoon, KL Mowry
Developmental cell 15 (3), 426-436, 2008
932008
Molecular motors: directing traffic during RNA localization
JA Gagnon, KL Mowry
Critical reviews in biochemistry and molecular biology 46 (3), 229-239, 2011
592011
PTB/hnRNP I is required for RNP remodeling during RNA localization in Xenopus oocytes
RA Lewis, JA Gagnon, KL Mowry
Molecular and cellular biology 28 (2), 678-686, 2008
512008
Evolutionarily conserved regulation of hypocretin neuron specification by Lhx9
J Liu, FT Merkle, AV Gandhi, JA Gagnon, IG Woods, CN Chiu, ...
Development 142 (6), 1113-1124, 2015
352015
Directional transport is mediated by a Dynein-dependent step in an RNA localization pathway
JA Gagnon, JA Kreiling, EA Powrie, TR Wood, KL Mowry
PLoS Biology 11 (4), e1001551, 2013
302013
Expansion microscopy of zebrafish for neuroscience and developmental biology studies
L Freifeld, I Odstrcil, D Förster, A Ramirez, JA Gagnon, O Randlett, ...
Proceedings of the National Academy of Sciences 114 (50), E10799-E10808, 2017
272017
Nodal patterning without Lefty inhibitory feedback is functional but fragile
KW Rogers, ND Lord, JA Gagnon, A Pauli, S Zimmerman, DC Aksel, ...
Elife 6, e28785, 2017
232017
Recording development with single cell dynamic lineage tracing
A McKenna, JA Gagnon
Development 146 (12), dev169730, 2019
162019
Large-scale reconstruction of cell lineages using single-cell readout of transcriptomes and CRISPR–Cas9 barcodes by scGESTALT
B Raj, JA Gagnon, AF Schier
Nature protocols 13 (11), 2685-2713, 2018
142018
Toddler signaling regulates mesodermal cell migration downstream of Nodal signaling
ML Norris, A Pauli, JA Gagnon, ND Lord, KW Rogers, C Mosimann, LI Zon, ...
Elife 6, e22626, 2017
112017
Visualization of mRNA Localization in Xenopus Oocytes
JA Gagnon, KL Mowry
RNA Detection and Visualization, 71-82, 2011
112011
The primary role of zebrafish nanog is in extra-embryonic tissue
JA Gagnon, K Obbad, AF Schier
Development 145 (1), dev147793, 2018
10*2018
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Articles 1–20