Timothy Danford
Timothy Danford
Application Architect, Novartis
Verified email at novartis.com
Title
Cited by
Cited by
Year
Transcriptional regulatory code of a eukaryotic genome
CT Harbison, DB Gordon, TI Lee, NJ Rinaldi, KD Macisaac, TW Danford, ...
Nature 431 (7004), 99-104, 2004
23982004
Tissue-specific transcriptional regulation has diverged significantly between human and mouse
DT Odom, RD Dowell, ES Jacobsen, W Gordon, TW Danford, ...
Nature genetics 39 (6), 730-732, 2007
5482007
Genotype to phenotype: a complex problem
RD Dowell, O Ryan, A Jansen, D Cheung, S Agarwala, T Danford, ...
Science 328 (5977), 469, 2010
3302010
Core transcriptional regulatory circuitry in human hepatocytes
DT Odom, RD Dowell, ES Jacobsen, L Nekludova, PA Rolfe, TW Danford, ...
Molecular systems biology 2 (1), 2006
2082006
Erratum: High-resolution computational models of genome binding events
Y Qi, A Rolfe, KD MacIsaac, GK Gerber, D Pokholok, J Zeitlinger, ...
Nature Biotechnology 24 (10), 1293, 2006
105*2006
High-resolution computational models of genome binding events
Y Qi, A Rolfe, KD MacIsaac, GK Gerber, D Pokholok, J Zeitlinger, ...
Nature biotechnology 24 (8), 963-970, 2006
1052006
Zebrafish promoter microarrays identify actively transcribed embryonic genes
FC Wardle, DT Odom, GW Bell, B Yuan, TW Danford, EL Wiellette, ...
Genome Biology 7 (8), R71, 2006
882006
Analysis of the mouse embryonic stem cell regulatory networks obtained by ChIP-chip and ChIP-PET
D Mathur, TW Danford, LA Boyer, RA Young, DK Gifford, R Jaenisch
Genome Biology 9 (8), R126, 2008
722008
GSE: a comprehensive database system for the representation, retrieval, and analysis of microarray data
T Danford, A Rolfe, D Gifford
Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing, 539, 2008
92008
Discovering Regulatory Overlapping RNA Transcripts
T Danford, R Dowell, S Agarwala, P Grisafi, G Fink, D Gifford
Journal of Computational Biology 18 (3), 295-303, 2011
12011
Discovering Regulatory Overlapping RNA Transcripts
T Danford, R Dowell, S Agarwala, P Grisafi, G Fink, D Gifford
Research in Computational Molecular Biology, 110-122, 2010
12010
Dissecting the spatial structure of overlapping transcription in budding yeast
DK Gifford, TW Danford
Massachusetts Institute of Technology, 2010
2010
Integrating Genomic Conservation Data with Motif Discovery
TW Danford
Massachusetts Institute of Technology, Dept. of Electrical Engineering and …, 2004
2004
Integrating genomic conservation data with motif discovery
DK Gifford, TW Danford
Massachusetts Institute of Technology, 2004
2004
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