| The OMA orthology database in 2018: retrieving evolutionary relationships among all domains of life through richer web and programmatic interfaces AM Altenhoff, NM Glover, CM Train, K Kaleb, A Warwick Vesztrocy, ... Nucleic acids research 46 (D1), D477-D485, 2018 | 222 | 2018 |
| Phylo.io : Interactive Viewing and Comparison of Large Phylogenetic Trees on the Web O Robinson, D Dylus, C Dessimoz Molecular biology and evolution 33 (8), 2163-2166, 2016 | 186 | 2016 |
| OMA standalone: orthology inference among public and custom genomes and transcriptomes AM Altenhoff, J Levy, M Zarowiecki, B Tomiczek, AW Vesztrocy, ... Genome research 29 (7), 1152-1163, 2019 | 92 | 2019 |
| The phylogenetic range of bacterial and viral pathogens of vertebrates LP Shaw, AD Wang, D Dylus, M Meier, G Pogacnik, C Dessimoz, ... Molecular ecology 29 (17), 3361-3379, 2020 | 66 | 2020 |
| Expression of skeletogenic genes during arm regeneration in the brittle star Amphiura filiformis A Czarkwiani, DV Dylus, P Oliveri Gene Expression Patterns 13 (8), 464-472, 2013 | 57 | 2013 |
| Large-scale gene expression study in the ophiuroid Amphiura filiformis provides insights into evolution of gene regulatory networks DV Dylus, A Czarkwiani, J Stångberg, O Ortega-Martinez, S Dupont, ... Evodevo 7 (1), 1-17, 2016 | 48 | 2016 |
| Skeletal regeneration in the brittle star Amphiura filiformis A Czarkwiani, C Ferrario, DV Dylus, M Sugni, P Oliveri Frontiers in zoology 13, 1-17, 2016 | 46 | 2016 |
| Developmental transcriptomics of the brittle star Amphiura filiformis reveals gene regulatory network rewiring in echinoderm larval skeleton evolution DV Dylus, A Czarkwiani, LM Blowes, MR Elphick, P Oliveri Genome biology 19, 1-17, 2018 | 30 | 2018 |
| FGF signalling plays similar roles in development and regeneration of the skeleton in the brittle star Amphiura filiformis A Czarkwiani, DV Dylus, L Carballo, P Oliveri Development 148 (10), dev180760, 2021 | 21 | 2021 |
| RecPhyloXML: a format for reconciled gene trees W Duchemin, G Gence, AM Arigon Chifolleau, L Arvestad, MS Bansal, ... Bioinformatics 34 (21), 3646-3652, 2018 | 18 | 2018 |
| NGS-Based S. aureus Typing and Outbreak Analysis in Clinical Microbiology Laboratories: Lessons Learned From a Swiss-Wide Proficiency Test D Dylus, T Pillonel, O Opota, D Wüthrich, HMB Seth-Smith, A Egli, S Leo, ... Frontiers in microbiology 11, 591093, 2020 | 9 | 2020 |
| New genome assembly of the barn owl (Tyto alba alba) AL Ducrest, S Neuenschwander, E Schmid‐Siegert, M Pagni, C Train, ... Ecology and evolution 10 (5), 2284-2298, 2020 | 7 | 2020 |
| How to build phylogenetic species trees with OMA D Dylus, Y Nevers, AM Altenhoff, A Gürtler, C Dessimoz, NM Glover F1000Research 9, 2020 | 7 | 2020 |
| Taxon sampling unequally affects individual nodes in a phylogenetic tree: consequences for model gene tree construction in SwissTree B Boeckmann, D Dylus, S Moretti, A Altenhoff, CM Train, E Kriventseva, ... biorxiv, 181966, 2017 | 4 | 2017 |
| Bifurcation search via feedback loop breaking in biochemical signaling pathways with time delay S Waldherr, D Dylus, F Allgöwer Asian Journal of Control 13 (5), 691-700, 2011 | 4 | 2011 |
| Extracellular matrix gene expression during arm regeneration in Amphiura filiformis C Ferrario, A Czarkwiani, DV Dylus, L Piovani, MD Candia Carnevali, ... Cell and tissue research 381 (3), 411-426, 2020 | 3 | 2020 |
| Antibacterial inhibitors targeting the lipoprotein transport pathway M Vercruysse, D Dylus Biochimica et biophysica acta. Molecular cell research 1870 (5), 119472, 2023 | | 2023 |
| Inference of phylogenetic trees directly from raw sequencing reads using Read2Tree D Dylus, A Altenhoff, S Majidian, FJ Sedlazeck, C Dessimoz Nature Biotechnology, 1-9, 2023 | | 2023 |
| Read2Tree: scalable and accurate phylogenetic trees from raw reads D Dylus, A Altenhoff, S Majidian, FJ Sedlazeck, C Dessimoz bioRxiv, 2022.04. 18.488678, 2022 | | 2022 |
| How to build phylogenetic species trees with OMA [version 2; peer review: 2 approved with reservations] D Dylus, Y Nevers, AM Altenhoff, A Gürtler, C Dessimoz, NM Glover F1000Research 9, 2022 | | 2022 |
Christophe DessimozProfessor at UNIL and Director of SIB Swiss Institute of BioinformaticsVerified email at unil.ch
