Kirill Afonin
Kirill Afonin
Associate Professor of Chemistry at UNC Charlotte
Verified email at uncc.edu - Homepage
Title
Cited by
Cited by
Year
In vitro assembly of cubic RNA-based scaffolds designed in silico
KA Afonin, E Bindewald, AJ Yaghoubian, N Voss, E Jacovetty, BA Shapiro, ...
Nature nanotechnology 5 (9), 676-682, 2010
2902010
Self-assembling RNA nanorings based on RNAI/II inverse kissing complexes
WW Grabow, P Zakrevsky, KA Afonin, A Chworos, BA Shapiro, L Jaeger
Nano letters 11 (2), 878-887, 2011
1892011
Design and self-assembly of siRNA-functionalized RNA nanoparticles for use in automated nanomedicine
KA Afonin, WW Grabow, FM Walker, E Bindewald, MA Dobrovolskaia, ...
Nature protocols 6 (12), 2022, 2011
1522011
Multifunctional RNA nanoparticles
KA Afonin, M Viard, AY Koyfman, AN Martins, WK Kasprzak, M Panigaj, ...
Nano letters 14 (10), 5662-5671, 2014
1192014
Co-transcriptional assembly of chemically modified RNA nanoparticles functionalized with siRNAs
KA Afonin, M Kireeva, WW Grabow, M Kashlev, L Jaeger, BA Shapiro
Nano letters 12 (10), 5192-5195, 2012
1082012
Activation of different split functionalities on re-association of RNA–DNA hybrids
KA Afonin, M Viard, AN Martins, SJ Lockett, AE Maciag, EO Freed, ...
Nature nanotechnology 8 (4), 296-304, 2013
922013
Triggering of RNA Interference with RNA–RNA, RNA–DNA, and DNA–RNA Nanoparticles
KA Afonin, M Viard, I Kagiampakis, CL Case, MA Dobrovolskaia, ...
ACS nano 9 (1), 251-259, 2015
832015
In Silico Design and Enzymatic Synthesis of Functional RNA Nanoparticles
KA Afonin, WK Kasprzak, E Bindewald, M Kireeva, M Viard, M Kashlev, ...
Accounts of chemical research 47 (6), 1731-1741, 2014
682014
Specific RNA self-assembly with minimal paranemic motifs
KA Afonin, DJ Cieply, NB Leontis
Journal of the American Chemical Society 130 (1), 93-102, 2008
682008
Multistrand RNA secondary structure prediction and nanostructure design including pseudoknots
E Bindewald, K Afonin, L Jaeger, BA Shapiro
ACS nano 5 (12), 9542-9551, 2011
662011
TokenRNA: a new type of sequence‐specific, label‐free fluorescent biosensor for folded RNA molecules
KA Afonin, EO Danilov, IV Novikova, NB Leontis
Chembiochem 9 (12), 1902-1905, 2008
522008
In silico, in vitro, and in vivo studies indicate the potential use of bolaamphiphiles for therapeutic siRNAs delivery
T Kim, KA Afonin, M Viard, AY Koyfman, S Sparks, E Heldman, S Grinberg, ...
Molecular Therapy-Nucleic Acids 2, e80, 2013
502013
Co-transcriptional production of RNA–DNA hybrids for simultaneous release of multiple split functionalities
KA Afonin, R Desai, M Viard, ML Kireeva, E Bindewald, CL Case, ...
Nucleic acids research 42 (3), 2085-2097, 2014
472014
Computational and experimental characterization of RNA cubic nanoscaffolds
KA Afonin, W Kasprzak, E Bindewald, PS Puppala, AR Diehl, KT Hall, ...
Methods 67 (2), 256-265, 2014
452014
Generating new specific RNA interaction interfaces using C-loops
KA Afonin, NB Leontis
Journal of the American Chemical Society 128 (50), 16131-16137, 2006
442006
Multistrand structure prediction of nucleic acid assemblies and design of RNA switches
E Bindewald, KA Afonin, M Viard, P Zakrevsky, T Kim, BA Shapiro
Nano letters 16 (3), 1726-1735, 2016
422016
Functionally-interdependent shape-switching nanoparticles with controllable properties
JR Halman, E Satterwhite, B Roark, M Chandler, M Viard, A Ivanina, ...
Nucleic acids research 45 (4), 2210-2220, 2017
402017
Picomolar fingerprinting of nucleic acid nanoparticles using solid-state nanopores
MA Alibakhshi, JR Halman, J Wilson, A Aksimentiev, KA Afonin, ...
ACS nano 11 (10), 9701-9710, 2017
332017
Attenuation of loop-receptor interactions with pseudoknot formation
KA Afonin, YP Lin, ER Calkins, L Jaeger
Nucleic acids research 40 (5), 2168-2180, 2012
322012
Engineered RNA nanodesigns for applications in RNA nanotechnology
KA Afonin, B Lindsay, BA Shapiro
DNA and RNA Nanotechnology 1 (open-issue), 2013
312013
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Articles 1–20