Paul J. Berkman
Paul J. Berkman
Independent
Verified email at csiro.au - Homepage
Title
Cited by
Cited by
Year
The genome of the mesopolyploid crop species Brassica rapa
X Wang, H Wang, J Wang, R Sun, J Wu, S Liu, Y Bai, JH Mun, I Bancroft, ...
Nature genetics 43 (10), 1035-1039, 2011
16302011
Sequencing and assembly of low copy and genic regions of isolated Triticum aestivum chromosome arm 7DS
PJ Berkman, A Skarshewski, MT Lorenc, K Lai, C Duran, EYS Ling, ...
Plant biotechnology journal 9 (7), 768-775, 2011
1202011
Single nucleotide polymorphism discovery from wheat next‐generation sequence data
K Lai, C Duran, PJ Berkman, MT Lorenc, J Stiller, S Manoli, MJ Hayden, ...
Plant biotechnology journal 10 (6), 743-749, 2012
1052012
Next‐generation sequencing applications for wheat crop improvement
PJ Berkman, K Lai, MT Lorenc, D Edwards
American Journal of Botany 99 (2), 365-371, 2012
1032012
Sequencing wheat chromosome arm 7BS delimits the 7BS/4AL translocation and reveals homoeologous gene conservation
PJ Berkman, A Skarshewski, S Manoli, MT Lorenc, J Stiller, L Smits, K Lai, ...
TAG Theoretical and Applied Genetics 123 (3), 423-432, 2012
982012
Dispersion and domestication shaped the genome of bread wheat
PJ Berkman, P Visendi, HC Lee, J Stiller, S Manoli, MT Lorenc, K Lai, ...
Plant Biotechnology Journal 11 (5), 564-571, 2013
672013
Complete Genome Sequence of Sporisorium scitamineum and Biotrophic Interaction Transcriptome with Sugarcane
LM Taniguti, PDC Schaker, J Benevenuto, LP Peters, G Carvalho, ...
PloS one 10 (6), e0129318, 2015
602015
Discovery of single nucleotide polymorphisms in complex genomes using SGSautoSNP
MT Lorenc, S Hayashi, J Stiller, H Lee, S Manoli, P Ruperao, P Visendi, ...
Biology 1 (2), 370-382, 2012
572012
Sequence-based analysis of translocations and inversions in bread wheat (Triticum aestivum L.)
J Ma, J Stiller, PJ Berkman, Y Wei, J Rogers, C Feuillet, J Dolezel, ...
PloS one 8 (11), e79329, 2013
552013
Future tools for association mapping in crop plants
C Duran, D Eales, D Marshall, M Imelfort, J Stiller, PJ Berkman, T Clark, ...
Genome 53 (11), 1017-1023, 2010
512010
WheatGenome. info: an integrated database and portal for wheat genome information
K Lai, PJ Berkman, MT Lorenc, C Duran, L Smits, S Manoli, J Stiller, ...
Plant and Cell Physiology 53 (2), e2-e2, 2012
492012
The defence‐associated transcriptome of hexaploid wheat displays homoeolog expression and induction bias
JJ Powell, TL Fitzgerald, J Stiller, PJ Berkman, DM Gardiner, JM Manners, ...
Plant biotechnology journal 15 (4), 533-543, 2017
392017
Targeted identification of genomic regions using TAGdb
DJ Marshall, A Hayward, D Eales, M Imelfort, J Stiller, PJ Berkman, ...
Plant Methods 6 (1), 19, 2010
372010
Identification and characterization of more than 4 million intervarietal SNP s across the group 7 chromosomes of bread wheat
K Lai, MT Lorenc, HC Lee, PJ Berkman, PE Bayer, P Visendi, P Ruperao, ...
Plant biotechnology journal 13 (1), 97-104, 2015
362015
Comparative mapping in the Poaceae family reveals translocations in the complex polyploid genome of sugarcane
KS Aitken, MD McNeil, PJ Berkman, S Hermann, A Kilian, PC Bundock, ...
BMC plant biology 14 (1), 190, 2014
352014
Analysis of the resistance mechanisms in sugarcane during Sporisorium scitamineum infection using RNA-seq and microscopy
MD McNeil, SA Bhuiyan, PJ Berkman, BJ Croft, KS Aitken
PLoS One 13 (5), e0197840, 2018
142018
An efficient approach to BAC based assembly of complex genomes
P Visendi, PJ Berkman, S Hayashi, AA Golicz, PE Bayer, P Ruperao, ...
Plant Methods 12 (1), 2, 2016
122016
A Survey Sequence Comparison of Saccharum Genotypes Reveals Allelic Diversity Differences
PJ Berkman, PC Bundock, RE Casu, RJ Henry, AL Rae, KS Aitken
Tropical Plant Biology 7 (2), 71-83, 2014
112014
Computational identification and comparative analysis of miRNAs in wheat group 7 chromosomes
P Deng, X Nie, L Wang, L Cui, P Liu, W Tong, SS Biradar, D Edwards, ...
Plant molecular biology reporter 32 (2), 487-500, 2014
92014
Generation of a 345K sugarcane SNP chip
K Aitken, A Farmer, P Berkman, C Muller, X Wei, E Demano, P Jackson, ...
Proc. Aust. Soc. Sugar Cane Technol 29, 1165-1172, 2016
52016
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Articles 1–20