Takeshi Masuda
Takeshi Masuda
Assistant Professor, Kumamoto University
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Multiple high-throughput analyses monitor the response of E. coli to perturbations
N Ishii, K Nakahigashi, T Baba, M Robert, T Soga, A Kanai, T Hirasawa, ...
Science 316 (5824), 593-597, 2007
Phase transfer surfactant-aided trypsin digestion for membrane proteome analysis
T Masuda, M Tomita, Y Ishihama
Journal of proteome research 7 (2), 731-740, 2008
Phosphopeptide Enrichment by Aliphatic Hydroxy Acid-modified Metal Oxide Chromatography for Nano-LC-MS/MS in Proteomics Applications* S
N Sugiyama, T Masuda, K Shinoda, A Nakamura, M Tomita, Y Ishihama
Molecular & Cellular Proteomics 6 (6), 1103-1109, 2007
Characterization of Genomic Deletion Efficiency Mediated by Clustered Regularly Interspaced Palindromic Repeats (CRISPR)/Cas9 Nuclease System in Mammalian Cells*♦
MC Canver, DE Bauer, A Dass, YY Yien, J Chung, T Masuda, T Maeda, ...
Journal of Biological Chemistry 289 (31), 21312-21324, 2014
Transcription factors LRF and BCL11A independently repress expression of fetal hemoglobin
T Masuda, X Wang, M Maeda, MC Canver, F Sher, APW Funnell, C Fisher, ...
Science 351 (6270), 285-289, 2016
Unbiased quantitation of Escherichia coli membrane proteome using phase transfer surfactants
T Masuda, N Saito, M Tomita, Y Ishihama
Molecular & Cellular Proteomics 8 (12), 2770-2777, 2009
Global metabolic network reorganization by adaptive mutations allows fast growth of Escherichia coli on glycerol
KK Cheng, BS Lee, T Masuda, T Ito, K Ikeda, A Hirayama, L Deng, J Dong, ...
Nature communications 5 (1), 1-9, 2014
Microscale phosphoproteome analysis of 10 000 cells from human cancer cell lines
T Masuda, N Sugiyama, M Tomita, Y Ishihama
Analytical chemistry 83 (20), 7698-7703, 2011
Discovery of colorectal cancer biomarker candidates by membrane proteomic analysis and subsequent verification using selected reaction monitoring (SRM) and tissue microarray …
H Kume, S Muraoka, T Kuga, J Adachi, R Narumi, S Watanabe, ...
Molecular & Cellular Proteomics 13 (6), 1471-1484, 2014
Genome-wide CRISPR-Cas9 screen identifies leukemia-specific dependence on a pre-mRNA metabolic pathway regulated by DCPS
T Yamauchi, T Masuda, MC Canver, M Seiler, Y Semba, M Shboul, ...
Cancer cell 33 (3), 386-400. e5, 2018
Prediction of liquid chromatographic retention times of peptides generated by protease digestion of the Escherichia coli proteome using artificial neural networks
K Shinoda, M Sugimoto, N Yachie, N Sugiyama, T Masuda, M Robert, ...
Journal of proteome research 5 (12), 3312-3317, 2006
Phosphoproteome analysis of formalin-fixed and paraffin-embedded tissue sections mounted on microscope slides
M Wakabayashi, H Yoshihara, T Masuda, M Tsukahara, N Sugiyama, ...
Journal of proteome research 13 (2), 915-924, 2014
SIRT7 has a critical role in bone formation by regulating lysine acylation of SP7/Osterix
M Fukuda, T Yoshizawa, M Karim, SU Sobuz, W Korogi, D Kobayasi, ...
Nature communications 9 (1), 1-14, 2018
Nestin protein is phosphorylated in adult neural stem/progenitor cells and not endothelial progenitor cells
J Namiki, S Suzuki, T Masuda, Y Ishihama, H Okano
Stem cells international 2012, 2012
Role of the clathrin adaptor PICALM in normal hematopoiesis and polycythemia vera pathophysiology
Y Ishikawa, M Maeda, M Pasham, F Aguet, SK Tacheva-Grigorova, ...
haematologica 100 (4), 439, 2015
Development of a lipoplex-type mRNA carrier composed of an ionizable lipid with a vitamin E scaffold and the KALA peptide for use as an ex vivo dendritic cell-based cancer vaccine
N Tateshita, N Miura, H Tanaka, T Masuda, S Ohtsuki, K Tange, Y Nakai, ...
Journal of controlled release 310, 36-46, 2019
Chemical cleavage-assisted tryptic digestion for membrane proteome analysis
M Iwasaki, T Masuda, M Tomita, Y Ishihama
Journal of Proteome Research 8 (6), 3169-3175, 2009
In-depth membrane proteomic study of breast cancer tissues for the generation of a chromosome-based protein list
S Muraoka, H Kume, J Adachi, T Shiromizu, S Watanabe, T Masuda, ...
Journal of Proteome Research 12 (1), 208-213, 2013
A simplified and sensitive method to identify Alzheimer’s disease biomarker candidates using patient-derived induced pluripotent stem cells (iPSCs)
K Shirotani, K Matsuo, S Ohtsuki, T Masuda, M Asai, Y Kutoku, Y Ohsawa, ...
The Journal of Biochemistry 162 (6), 391-394, 2017
Nematode-specific tRNAs that decode an alternative genetic code for leucine
K Hamashima, K Fujishima, T Masuda, J Sugahara, M Tomita, A Kanai
Nucleic acids research 40 (8), 3653-3662, 2012
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