Matthias Lienhard
Cited by
Cited by
A global reference for human genetic variation
1000 Genomes Project Consortium
Nature 526 (7571), 68, 2015
An integrated map of genetic variation from 1,092 human genomes
1000 Genomes Project Consortium
Nature 491 (7422), 56, 2012
Analyzing and interpreting genome data at the network level with ConsensusPathDB
R Herwig, C Hardt, M Lienhard, A Kamburov
Nature protocols 11 (10), 1889-1907, 2016
MEDIPS: genome-wide differential coverage analysis of sequencing data derived from DNA enrichment experiments
M Lienhard, C Grimm, M Morkel, R Herwig, L Chavez
Bioinformatics 30 (2), 284-286, 2014
DMSO induces drastic changes in human cellular processes and epigenetic landscape in vitro
M Verheijen, M Lienhard, Y Schrooders, O Clayton, R Nudischer, ...
Scientific reports 9 (1), 4641, 2019
Epigenomic analysis of primary human T cells reveals enhancers associated with TH2 memory cell differentiation and asthma susceptibility
G Seumois, L Chavez, A Gerasimova, M Lienhard, N Omran, L Kalinke, ...
Nature immunology 15 (8), 777-788, 2014
Therapeutic targeting of ependymoma as informed by oncogenic enhancer profiling
SC Mack, KW Pajtler, L Chavez, K Okonechnikov, KC Bertrand, X Wang, ...
Nature 553 (7686), 101-105, 2018
The histone deacetylase SIRT6 controls embryonic stem cell fate via TET-mediated production of 5-hydroxymethylcytosine
JP Etchegaray, L Chavez, Y Huang, KN Ross, J Choi, B Martinez-Pastor, ...
Nature cell biology 17 (5), 545-557, 2015
Simultaneous deletion of the methylcytosine oxidases Tet1 and Tet3 increases transcriptome variability in early embryogenesis
J Kang, M Lienhard, WA Pastor, A Chawla, M Novotny, A Tsagaratou, ...
Proceedings of the National Academy of Sciences 112 (31), E4236-E4245, 2015
The digital bee brain: integrating and managing neurons in a common 3D reference system
J Rybak, A Kuß, H Lamecker, S Zachow, HC Hege, M Lienhard, J Singer, ...
Frontiers in systems neuroscience 4, 30, 2010
RNA-Seq provides new insights in the transcriptome responses induced by the carcinogen benzo [a] pyrene
J van Delft, S Gaj, M Lienhard, MW Albrecht, A Kirpiy, K Brauers, ...
Toxicological sciences 130 (2), 427-439, 2012
DNA–methylome analysis of mouse intestinal adenoma identifies a tumour-specific signature that is partly conserved in human colon cancer
C Grimm, L Chavez, M Vilardell, AL Farrall, S Tierling, JW Böhm, P Grote, ...
PLoS genetics 9 (2), e1003250, 2013
QSEA—modelling of genome-wide DNA methylation from sequencing enrichment experiments
M Lienhard, S Grasse, J Rolff, S Frese, U Schirmer, M Becker, S Börno, ...
Nucleic acids research 45 (6), e44-e44, 2017
Epigenomic profiling of non-small cell lung cancer xenografts uncover LRP12 DNA methylation as predictive biomarker for carboplatin resistance
S Grasse, M Lienhard, S Frese, M Kerick, A Steinbach, C Grimm, ...
Genome medicine 10 (1), 1-16, 2018
Network integration and modelling of dynamic drug responses at multi-omics levels
N Selevsek, F Caiment, R Nudischer, H Gmuender, I Agarkova, ...
Communications biology 3 (1), 573, 2020
Systematic assessment of long-read RNA-seq methods for transcript identification and quantification
FJ Pardo-Palacios, D Wang, F Reese, M Diekhans, S Carbonell-Sala, ...
bioRxiv, 2021
Deregulation and epigenetic modification of BCL2-family genes cause resistance to venetoclax in hematologic malignancies
D Thomalla, L Beckmann, C Grimm, M Oliverio, L Meder, CD Herling, ...
Blood, The Journal of the American Society of Hematology 140 (20), 2113-2126, 2022
ARH-seq: identification of differential splicing in RNA-seq data
A Rasche, M Lienhard, ML Yaspo, H Lehrach, R Herwig
Nucleic acids research 42 (14), e110-e110, 2014
An integrated map of genetic variation from 1,092 human genomes
1000 Genomes Project Consortium Corresponding Author McVean Gil A. mcvean ...
Nature 491 (7422), 56-65, 2012
MEDIPS:(MeD) IP-seq data analysis
L Chavez, M Lienhard, J Dietrich
R package version 1 (0), 2013
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