Robin Dowell
TitleCited byYear
Tissue-specific transcriptional regulation has diverged significantly between human and mouse
DT Odom, RD Dowell, ES Jacobsen, W Gordon, TW Danford, ...
Nature genetics 39 (6), 730-732, 2007
5452007
A communal catalogue reveals Earth’s multiscale microbial diversity
LR Thompson, JG Sanders, D McDonald, A Amir, J Ladau, KJ Locey, ...
Nature 551 (7681), 457-463, 2017
5112017
The distributed annotation system
RD Dowell, RM Jokerst, A Day, SR Eddy, L Stein
BMC bioinformatics 2 (1), 7, 2001
5042001
Genotype to phenotype: a complex problem
RD Dowell, O Ryan, A Jansen, D Cheung, S Agarwala, T Danford, ...
Science 328 (5977), 469-469, 2010
3282010
Evaluation of several lightweight stochastic context-free grammars for RNA secondary structure prediction
RD Dowell, SR Eddy
BMC bioinformatics 5 (1), 71, 2004
3272004
Polyploidy can drive rapid adaptation in yeast
AM Selmecki, YE Maruvka, PA Richmond, M Guillet, N Shoresh, ...
Nature 519 (7543), 349-352, 2015
2372015
HIF1A employs CDK8-mediator to stimulate RNAPII elongation in response to hypoxia
MD Galbraith, MA Allen, CL Bensard, X Wang, MK Schwinn, B Qin, ...
Cell 153 (6), 1327-1339, 2013
2102013
Core transcriptional regulatory circuitry in human hepatocytes
DT Odom, RD Dowell, ES Jacobsen, L Nekludova, PA Rolfe, TW Danford, ...
Molecular systems biology 2 (1), 2006
2082006
Toggle involving cis-interfering noncoding RNAs controls variegated gene expression in yeast
SL Bumgarner, RD Dowell, P Grisafi, DK Gifford, GR Fink
Proceedings of the National Academy of Sciences 106 (43), 18321-18326, 2009
1742009
Global analysis of p53-regulated transcription identifies its direct targets and unexpected regulatory mechanisms
MA Allen, Z Andrysik, VL Dengler, HS Mellert, A Guarnieri, JA Freeman, ...
Elife 3, e02200, 2014
1522014
Efficient pairwise RNA structure prediction and alignment using sequence alignment constraints
RD Dowell, SR Eddy
BMC bioinformatics 7 (1), 400, 2006
1482006
Neural network analysis of lymphoma microarray data: prognosis and diagnosis near-perfect
MC O'Neill, L Song
BMC bioinformatics 4 (1), 13, 2003
1112003
High-resolution computational models of genome binding events
Y Qi, A Rolfe, KD MacIsaac, GK Gerber, D Pokholok, J Zeitlinger, ...
Nature biotechnology 24 (8), 963-970, 2006
1052006
Transcription factor binding variation in the evolution of gene regulation
RD Dowell
Trends in genetics 26 (11), 468-475, 2010
642010
Identification of mediator kinase substrates in human cells using cortistatin A and quantitative phosphoproteomics
ZC Poss, CC Ebmeier, AT Odell, A Tangpeerachaikul, T Lee, HE Pelish, ...
Cell reports 15 (2), 436-450, 2016
572016
Foxc1 reinforces quiescence in self-renewing hair follicle stem cells
L Wang, JA Siegenthaler, RD Dowell, R Yi
Science 351 (6273), 613-617, 2016
532016
Prolonged Cre expression driven by the α-myosin heavy chain promoter can be cardiotoxic
EK Pugach, PA Richmond, JG Azofeifa, RD Dowell, LA Leinwand
Journal of molecular and cellular cardiology 86, 54-61, 2015
412015
Automated discovery of functional generality of human gene expression programs
GK Gerber, RD Dowell, TS Jaakkola, DK Gifford
PLoS computational biology 3 (8), 2007
402007
Human TFIIH kinase CDK7 regulates transcription-associated chromatin modifications
CC Ebmeier, B Erickson, BL Allen, MA Allen, H Kim, N Fong, JR Jacobsen, ...
Cell reports 20 (5), 1173-1186, 2017
382017
Control of inducible gene expression links cohesin to hematopoietic progenitor self-renewal and differentiation
S Cuartero, FD Weiss, G Dharmalingam, Y Guo, E Ing-Simmons, ...
Nature immunology 19 (9), 932-941, 2018
372018
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