|Positional distribution of transcription factor binding sites in Arabidopsis thaliana|
CP Yu, JJ Lin, WH Li
Scientific reports 6, 25164, 2016
|Transcriptome dynamics of developing maize leaves and genomewide prediction of cis elements and their cognate transcription factors|
CP Yu, SCC Chen, YM Chang, WY Liu, HH Lin, JJ Lin, HJ Chen, YJ Lu, ...
Proceedings of the National Academy of Sciences 112 (19), E2477-E2486, 2015
|Anatomical and transcriptional dynamics of maize embryonic leaves during seed germination|
WY Liu, YM Chang, SCC Chen, CH Lu, YH Wu, MYJ Lu, DR Chen, ...
Proceedings of the National Academy of Sciences 110 (10), 3979-3984, 2013
|Comparative transcriptomics method to infer gene coexpression networks and its applications to maize and rice leaf transcriptomes|
YM Chang, HH Lin, WY Liu, CP Yu, HJ Chen, PP Wartini, YY Kao, YH Wu, ...
Proceedings of the National Academy of Sciences 116 (8), 3091-3099, 2019
|Comparative genomics of Vibrio campbellii strains and core species of the Vibrio Harveyi clade|
HM Ke, A Prachumwat, CP Yu, YT Yang, S Promsri, KF Liu, CF Lo, ...
Scientific reports 7, 41394, 2017
|Elevated auxin biosynthesis and transport underlie high vein density in C4 leaves|
CF Huang, CP Yu, YH Wu, MYJ Lu, SL Tu, SH Wu, SH Shiu, MSB Ku, ...
Proceedings of the National Academy of Sciences 114 (33), E6884-E6891, 2017
|Maize and millet transcription factors annotated using comparative genomic and transcriptomic data|
JJ Lin, CP Yu, YM Chang, SCC Chen, WH Li
BMC genomics 15 (1), 818, 2014
|Identification and evolutionary analysis of long non-coding RNAs in zebra finch|
CK Chen, CP Yu, SC Li, SM Wu, MYJ Lu, YH Chen, DR Chen, CS Ng, ...
BMC genomics 18 (1), 117, 2017
|Insights into the regulation of C 4 leaf development from comparative transcriptomic analysis|
CF Huang, YM Chang, JJ Lin, CP Yu, HH Lin, WY Liu, S Yeh, SL Tu, ...
Current opinion in plant biology 30, 1-10, 2016
|Integrity of H1 helix in prion protein revealed by molecular dynamic simulations to be especially vulnerable to changes in the relative orientation of H1 and its S1 flank|
CY Tseng, CP Yu, HC Lee
European Biophysics Journal 38 (5), 601-611, 2009
|Regulatory Divergence among Beta-Keratin Genes during Bird Evolution|
MJ Bhattacharjee, CP Yu, JJ Lin, CS Ng, TY Wang, HH Lin, WH Li
Molecular Biology and Evolution 33 (11), 2769-2780, 2016
|Predicting transcription factor binding sites and their cognate transcription factors using gene expression data|
CP Yu, WH Li
Plant Gene Regulatory Networks, 271-282, 2017
|From laws of inference to protein folding dynamics|
CY Tseng, CP Yu, HC Lee
Physical Review E 82 (2), 021914, 2010
|Popmarker: Identifying Phylogenetic Markers at the Population Level|
HM Ke, CP Yu, YC Liu, IJ Tsai
Evolutionary Bioinformatics 13, 1176934317724404, 2017
|Kinetics and Thermodynamics in the Folding of Trp-Cage: Simulation by Parallel-Tempering|
JL Lo, CP Yu, HC Lee
|Parallel Tempering Simulation of a Miniprotein: Trp-Cage|
CL Lo, CP Yu, HC Lee