| Robust transcriptome-wide discovery of RNA-binding protein binding sites with enhanced CLIP (eCLIP) EL Van Nostrand, GA Pratt, AA Shishkin, C Gelboin-Burkhart, MY Fang, ... Nature methods 13 (6), 508-514, 2016 | 1141 | 2016 |
| A large-scale binding and functional map of human RNA-binding proteins EL Van Nostrand, P Freese, GA Pratt, X Wang, X Wei, R Xiao, SM Blue, ... Nature 583 (7818), 711-719, 2020 | 708 | 2020 |
| Sequence, structure, and context preferences of human RNA binding proteins D Dominguez, P Freese, MS Alexis, A Su, M Hochman, T Palden, ... Molecular cell 70 (5), 854-867. e9, 2018 | 459 | 2018 |
| The clothes make the mRNA: past and present trends in mRNP fashion G Singh, G Pratt, GW Yeo, MJ Moore Annual review of biochemistry 84, 325-354, 2015 | 400 | 2015 |
| Rbfox proteins regulate alternative mRNA splicing through evolutionarily conserved RNA bridges MT Lovci, D Ghanem, H Marr, J Arnold, S Gee, M Parra, TY Liang, ... Nature structural & molecular biology 20 (12), 1434-1442, 2013 | 357 | 2013 |
| A temporal chromatin signature in human embryonic stem cells identifies regulators of cardiac development SL Paige, S Thomas, CL Stoick-Cooper, H Wang, L Maves, R Sandstrom, ... Cell 151 (1), 221-232, 2012 | 348 | 2012 |
| The Ro60 autoantigen binds endogenous retroelements and regulates inflammatory gene expression T Hung, GA Pratt, B Sundararaman, MJ Townsend, C Chaivorapol, ... Science 350 (6259), 455-459, 2015 | 237 | 2015 |
| Distinct and shared functions of ALS-associated proteins TDP-43, FUS and TAF15 revealed by multisystem analyses K Kapeli, GA Pratt, AQ Vu, KR Hutt, FJ Martinez, B Sundararaman, ... Nature communications 7 (1), 12143, 2016 | 176 | 2016 |
| Widespread RNA editing dysregulation in brains from autistic individuals SS Tran, HI Jun, JH Bahn, A Azghadi, G Ramaswami, EL Van Nostrand, ... Nature neuroscience 22 (1), 25-36, 2019 | 161 | 2019 |
| SONAR discovers RNA-binding proteins from analysis of large-scale protein-protein interactomes KW Brannan, W Jin, SC Huelga, CAS Banks, JM Gilmore, L Florens, ... Molecular cell 64 (2), 282-293, 2016 | 161 | 2016 |
| Protein-RNA networks regulated by normal and ALS-associated mutant HNRNPA2B1 in the nervous system FJ Martinez, GA Pratt, EL Van Nostrand, R Batra, SC Huelga, K Kapeli, ... Neuron 92 (4), 780-795, 2016 | 154 | 2016 |
| Enhanced CLIP uncovers IMP protein-RNA targets in human pluripotent stem cells important for cell adhesion and survival AE Conway, EL Van Nostrand, GA Pratt, S Aigner, ML Wilbert, ... Cell reports 15 (3), 666-679, 2016 | 141 | 2016 |
| Resources for the comprehensive discovery of functional RNA elements B Sundararaman, L Zhan, SM Blue, R Stanton, K Elkins, S Olson, X Wei, ... Molecular cell 61 (6), 903-913, 2016 | 135 | 2016 |
| Principles of RNA processing from analysis of enhanced CLIP maps for 150 RNA binding proteins EL Van Nostrand, GA Pratt, BA Yee, EC Wheeler, SM Blue, J Mueller, ... Genome biology 21 (1), 1-26, 2020 | 133 | 2020 |
| Musashi-2 attenuates AHR signalling to expand human haematopoietic stem cells S Rentas, NT Holzapfel, MS Belew, GA Pratt, V Voisin, BT Wilhelm, ... Nature 532 (7600), 508-511, 2016 | 127 | 2016 |
| Target discrimination in nonsense-mediated mRNA decay requires Upf1 ATPase activity SR Lee, GA Pratt, FJ Martinez, GW Yeo, J Lykke-Andersen Molecular cell 59 (3), 413-425, 2015 | 100 | 2015 |
| Regulation of RNA editing by RNA-binding proteins in human cells G Quinones-Valdez, SS Tran, HI Jun, JH Bahn, EW Yang, L Zhan, ... Communications biology 2 (1), 19, 2019 | 95 | 2019 |
| Robust, cost-effective profiling of RNA binding protein targets with single-end enhanced crosslinking and immunoprecipitation (seCLIP) EL Van Nostrand, TB Nguyen, C Gelboin-Burkhart, R Wang, SM Blue, ... mRNA Processing: Methods and Protocols, 177-200, 2017 | 87 | 2017 |
| RBP-Maps enables robust generation of splicing regulatory maps BA Yee, GA Pratt, BR Graveley, EL Van Nostrand, GW Yeo Rna 25 (2), 193-204, 2019 | 65 | 2019 |
| Large-scale tethered function assays identify factors that regulate mRNA stability and translation EC Luo, JL Nathanson, FE Tan, JL Schwartz, JC Schmok, A Shankar, ... Nature structural & molecular biology 27 (10), 989-1000, 2020 | 46 | 2020 |
Gene Yeo PhD MBAProfessor of Cellular and Molecular Medicine at UC San DiegoVerified email at ucsd.edu
