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| Landscape of transcription in human cells S Djebali, CA Davis, A Merkel, A Dobin, T Lassmann, A Mortazavi, ... Nature 489 (7414), 101-108, 2012 | 5473 | 2012 |
| The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression T Derrien, R Johnson, G Bussotti, A Tanzer, S Djebali, H Tilgner, ... Genome research 22 (9), 1775-1789, 2012 | 5267 | 2012 |
| A user's guide to the encyclopedia of DNA elements (ENCODE) ENCODE Project Consortium PLoS biology 9 (4), e1001046, 2011 | 1442 | 2011 |
| A single-molecule long-read survey of the human transcriptome D Sharon, H Tilgner, F Grubert, M Snyder Nature biotechnology 31 (11), 1009-1014, 2013 | 635 | 2013 |
| SynGO: an evidence-based, expert-curated knowledge base for the synapse F Koopmans, P van Nierop, M Andres-Alonso, A Byrnes, T Cijsouw, ... Neuron 103 (2), 217-234. e4, 2019 | 546 | 2019 |
| Nucleosome positioning as a determinant of exon recognition H Tilgner, C Nikolaou, S Althammer, M Sammeth, M Beato, J Valcárcel, ... Nature structural & molecular biology 16 (9), 996-1001, 2009 | 541 | 2009 |
| Deep sequencing of subcellular RNA fractions shows splicing to be predominantly co-transcriptional in the human genome but inefficient for lncRNAs H Tilgner, DG Knowles, R Johnson, CA Davis, S Chakrabortty, S Djebali, ... Genome research 22 (9), 1616-1625, 2012 | 512 | 2012 |
| Single-cell isoform RNA sequencing characterizes isoforms in thousands of cerebellar cells I Gupta, PG Collier, B Haase, A Mahfouz, A Joglekar, T Floyd, ... Nature biotechnology 36 (12), 1197-1202, 2018 | 275 | 2018 |
| Defining a personal, allele-specific, and single-molecule long-read transcriptome H Tilgner, F Grubert, D Sharon, MP Snyder Proceedings of the National Academy of Sciences 111 (27), 9869-9874, 2014 | 265 | 2014 |
| Gaining comprehensive biological insight into the transcriptome by performing a broad-spectrum RNA-seq analysis SME Sahraeian, M Mohiyuddin, R Sebra, H Tilgner, PT Afshar, KF Au, ... Nature communications 8 (1), 59, 2017 | 257 | 2017 |
| Integrative analysis of RNA, translation, and protein levels reveals distinct regulatory variation across humans C Cenik, ES Cenik, GW Byeon, F Grubert, SI Candille, D Spacek, ... Genome research 25 (11), 1610-1621, 2015 | 222 | 2015 |
| Comprehensive transcriptome analysis using synthetic long-read sequencing reveals molecular co-association of distant splicing events H Tilgner, F Jahanbani, T Blauwkamp, A Moshrefi, E Jaeger, F Chen, ... Nature biotechnology 33 (7), 736-742, 2015 | 208 | 2015 |
| A spatially resolved brain region-and cell type-specific isoform atlas of the postnatal mouse brain A Joglekar, A Prjibelski, A Mahfouz, P Collier, S Lin, AK Schlusche, ... Nature Communications 12 (1), 463, 2021 | 136 | 2021 |
| Interplay between BRCA1 and RHAMM regulates epithelial apicobasal polarization and may influence risk of breast cancer CA Maxwell, J Benítez, L Gómez-Baldó, A Osorio, N Bonifaci, ... PLoS biology 9 (11), e1001199, 2011 | 134 | 2011 |
| Absence of canonical marks of active chromatin in developmentally regulated genes S Pérez-Lluch, E Blanco, H Tilgner, J Curado, M Ruiz-Romero, ... Nature genetics 47 (10), 1158-1167, 2015 | 84 | 2015 |
| Microfluidic isoform sequencing shows widespread splicing coordination in the human transcriptome H Tilgner, F Jahanbani, I Gupta, P Collier, E Wei, M Rasmussen, ... Genome research 28 (2), 231-242, 2018 | 72 | 2018 |
| Schizophrenia is defined by cell-specific neuropathology and multiple neurodevelopmental mechanisms in patient-derived cerebral organoids M Notaras, A Lodhi, F Dündar, P Collier, NM Sayles, H Tilgner, ... Molecular Psychiatry 27 (3), 1416-1434, 2022 | 68 | 2022 |
| Accurate identification and analysis of human mRNA isoforms using deep long read sequencing H Tilgner, D Raha, L Habegger, M Mohiuddin, M Gerstein, M Snyder G3: Genes, Genomes, Genetics 3 (3), 387-397, 2013 | 66 | 2013 |
| Single-nuclei isoform RNA sequencing unlocks barcoded exon connectivity in frozen brain tissue SA Hardwick, W Hu, A Joglekar, L Fan, PG Collier, C Foord, J Balacco, ... Nature biotechnology 40 (7), 1082-1092, 2022 | 60 | 2022 |
Roderic GuigoProfessor of Bioinformatics, Center for Genomic Regulation, Universitat Pompeu FabraVerified email at crg.cat
